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ON366409.1__UUW39252.1__X__00057

Bact-Vir

ON366409.1__UUW39252.1__X__00057

Identity

Accession:
ON366409 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-66
PDB
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.80 44.0 3.13e-01 100.0% 19.5%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 42.0 3.03e-01 100.0% 19.9%
1x5aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 45.0 3.97e-01 100.0% 44.0%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 40.0 2.90e-01 100.0% 20.2%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 41.0 3.22e-01 100.0% 27.5%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.69 55.0 4.88e-01 86.2% 98.9%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.69 52.0 4.88e-01 80.0% 67.5%
6iomB01 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.69 48.0 4.58e-01 100.0% 62.3%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 59.0 5.12e-01 100.0% 75.2%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 58.0 4.95e-01 100.0% 73.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.66 52.0 3.92e-01 87.7% 95.8%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.65 44.0 4.40e-01 100.0% 69.7%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.63 50.0 4.43e-01 86.2% 96.8%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.63 54.0 4.64e-01 100.0% 96.4%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 46.0 4.45e-01 100.0% 68.4%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 3.86e-01 100.0% 48.5%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 48.0 4.25e-01 100.0% 57.3%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.62 52.0 4.31e-01 100.0% 91.4%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 47.0 3.95e-01 100.0% 48.6%
2aehA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 47.0 4.19e-01 86.2% 96.9%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 43.0 3.55e-01 87.7% 40.3%
5kycB02 2.20.210.10 Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily 0.61 44.0 4.84e-01 100.0% 94.3%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.37e-01 100.0% 73.9%
1wojA00 3.90.1740.10 Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily 0.59 52.0 3.63e-01 98.5% 48.8%
1n26A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 38.0 3.35e-01 100.0% 41.3%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 4.24e-01 100.0% 75.0%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 39.0 3.38e-01 100.0% 41.7%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.58 45.0 4.35e-01 100.0% 73.7%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 3.80e-01 86.2% 55.6%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.58 48.0 4.08e-01 100.0% 55.0%
3rjuA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 53.0 3.27e-01 100.0% 86.6%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 45.0 3.94e-01 100.0% 56.8%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.58 51.0 3.72e-01 96.9% 72.1%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 3.99e-01 100.0% 73.6%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 49.0 4.06e-01 100.0% 52.9%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 3.91e-01 89.2% 67.3%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 48.0 4.13e-01 100.0% 58.3%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 51.0 3.12e-01 100.0% 86.2%
3lcyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.29e-01 100.0% 48.5%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.54 42.0 3.28e-01 92.3% 55.6%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.08e-01 100.0% 69.9%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 48.0 3.05e-01 100.0% 87.0%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 46.0 3.33e-01 100.0% 34.6%
2q0oA01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 48.0 3.46e-01 100.0% 60.7%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.52 40.0 3.30e-01 89.2% 78.8%
1r9fA01 3.30.390.180 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 0.51 44.0 3.76e-01 96.9% 78.9%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.81e-01 89.2% 68.2%
2rikA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.68e-01 89.2% 95.7%
5irbA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.42e-01 86.2% 94.2%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 43.0 4.30e-01 96.9% 98.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3626585 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 49.0 3.74e-01 100.0% 30.7%
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.72 48.0 5.37e-01 100.0% 92.0%
3760983 3335.1.1.3 beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C 0.70 61.0 5.30e-01 98.5% 98.0%
3243630 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.68 52.0 4.65e-01 100.0% 58.9%
5081134 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.67 47.0 4.89e-01 100.0% 80.0%
1833801 220.1.1.25 beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.66 58.0 4.95e-01 100.0% 73.1%
4935672 2492.1.1.7 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ 0.65 45.0 3.57e-01 100.0% 34.3%
4954188 2492.1.1.7 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ 0.64 45.0 3.46e-01 100.0% 32.2%
3601552 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.64 55.0 4.68e-01 98.5% 92.7%
4967222 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.64 47.0 4.90e-01 100.0% 86.7%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.64 47.0 4.66e-01 100.0% 74.3%
3606549 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.64 56.0 4.74e-01 100.0% 95.4%
3281774 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.63 54.0 4.63e-01 98.5% 96.4%
3630093 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.63 49.0 4.68e-01 100.0% 72.0%
3705308 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.63 55.0 4.60e-01 100.0% 90.4%
3600529 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 54.0 4.70e-01 100.0% 97.1%
4146498 220.1.1.25 beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.63 54.0 4.78e-01 100.0% 75.0%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.63 46.0 4.43e-01 100.0% 69.3%
3244701 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.63 49.0 3.58e-01 86.2% 57.2%
3281771 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.62 55.0 4.66e-01 100.0% 92.7%
3605590 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.62 54.0 4.59e-01 100.0% 94.5%
3712908 9.1.1.4 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.61 52.0 4.49e-01 100.0% 95.4%
3213931 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.60 53.0 4.21e-01 100.0% 49.2%
3739939 220.1.1.29 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.60 52.0 4.15e-01 100.0% 64.0%
3929515 382.1.1.21 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF28966 0.60 54.0 4.60e-01 100.0% 61.9%
3709816 306.5.1.0 a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP 0.60 46.0 3.92e-01 87.7% 88.7%
3447653 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 40.0 2.61e-01 70.8% 30.8%
3882269 220.1.1.25 beta barrels › PH domain-like › PH domain-like › PH domain-like › CARM1 0.58 50.0 4.37e-01 100.0% 78.1%
4989883 3268.1.1.0 a+b two layers › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase › N-terminal domain in xanthine dehydrogenase 0.57 45.0 4.36e-01 100.0% 77.3%
5029262 4114.1.1.0 a+b two layers › PHP14-like › PHP14-like › PHP14-like 0.56 48.0 4.05e-01 100.0% 55.5%
4857347 304.139.2.1 a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7f/Csy3 › Cas_Csy3 0.56 41.0 2.69e-01 100.0% 17.1%
4079979 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.56 42.0 3.81e-01 81.5% 72.2%
4096826 3019.1.1.1 beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN 0.56 46.0 4.01e-01 100.0% 70.9%
4946228 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 51.0 3.98e-01 100.0% 55.4%
4030292 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.37e-01 100.0% 98.6%
4140035 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.55 42.0 3.38e-01 87.7% 68.3%
3411558 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.54 46.0 3.71e-01 100.0% 47.9%
3658352 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.54 50.0 3.87e-01 100.0% 49.6%
3900451 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 3.86e-01 90.8% 61.0%
4449169 3018.1.1.0 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.54 43.0 4.10e-01 96.9% 80.0%
4375028 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.53 41.0 3.33e-01 83.1% 60.8%
None 0.53 45.0 3.25e-01 100.0% 81.9%
4944328 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 49.0 3.81e-01 100.0% 58.5%
4940035 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 48.0 4.02e-01 100.0% 61.8%
3441395 5.1.3.159 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.53 46.0 2.98e-01 98.5% 95.2%
3968768 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.53 47.0 4.53e-01 100.0% 97.3%
4000362 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.53 49.0 4.10e-01 100.0% 65.7%
4596042 223.1.1.7 a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind 0.53 48.0 3.50e-01 100.0% 60.0%
3834262 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.52 48.0 3.68e-01 100.0% 47.9%
3783266 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.52 48.0 3.82e-01 100.0% 64.0%
5073022 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 48.0 3.73e-01 100.0% 54.8%
5074455 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 3.86e-01 100.0% 64.5%
5067811 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.51 41.0 3.04e-01 92.3% 63.2%
3238927 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.50e-01 87.7% 92.0%
4015822 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 43.0 2.78e-01 100.0% 23.7%
4947055 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 46.0 3.57e-01 100.0% 62.9%
3848227 223.2.1.15 a+b three layers › Profilin-like › profilin-like › profilin-like › Longin 0.51 46.0 3.48e-01 100.0% 44.0%
3788240 223.2.1.20 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 0.51 47.0 3.32e-01 100.0% 46.5%
3716774 306.5.1.2 a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › PF28980 0.51 41.0 3.44e-01 90.8% 58.3%
4579960 3018.1.1.0 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.50 42.0 3.83e-01 100.0% 82.1%
3279960 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 39.0 2.85e-01 90.8% 68.4%
4623762 3018.1.1.1 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.50 42.0 3.76e-01 100.0% 81.0%
3215094 382.1.1.20 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF29036 0.50 43.0 3.66e-01 100.0% 58.1%