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ON366410.1__USL89220.1__vBBceSLY1_00001__00001
Bact-VirON366410.1__USL89220.1__vBBceSLY1_00001__00001
Identity
- Accession:
- ON366410 ↗
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Taxonomy
TaxID: 2950459
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-108
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.65 | 50.0 | 4.09e-01 | 84.4% | 51.2% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.61 | 43.0 | 4.13e-01 | 100.0% | 63.6% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 51.0 | 4.25e-01 | 100.0% | 63.6% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 42.0 | 3.47e-01 | 78.1% | 79.8% |
| 1edzA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 40.0 | 3.07e-01 | 71.9% | 38.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.58 | 51.0 | 4.00e-01 | 100.0% | 70.0% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 50.0 | 4.37e-01 | 100.0% | 79.4% |
| 4i14A02 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.58 | 40.0 | 3.32e-01 | 75.0% | 100.0% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 49.0 | 4.31e-01 | 100.0% | 66.7% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 49.0 | 4.46e-01 | 98.4% | 79.3% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 41.0 | 4.18e-01 | 100.0% | 83.9% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.56 | 50.0 | 3.09e-01 | 100.0% | 19.8% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 3.58e-01 | 93.8% | 59.7% |
| 4zgfA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 47.0 | 3.72e-01 | 100.0% | 75.2% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 3.62e-01 | 100.0% | 67.7% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.54 | 34.0 | 2.82e-01 | 76.6% | 36.6% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 33.0 | 3.20e-01 | 98.4% | 54.2% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 45.0 | 3.47e-01 | 90.6% | 46.3% |
| 2w18A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 48.0 | 3.04e-01 | 100.0% | 20.9% |
| 1bp1A01 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.52 | 45.0 | 3.31e-01 | 100.0% | 67.2% |
| 4e9kA00 | 2.60.120.1350 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 | 0.52 | 42.0 | 2.95e-01 | 95.3% | 78.3% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.20e-01 | 75.0% | 53.0% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 43.0 | 3.79e-01 | 96.9% | 79.6% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 41.0 | 3.08e-01 | 87.5% | 50.3% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 41.0 | 3.05e-01 | 100.0% | 42.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032337 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.91 | 83.0 | 5.95e-01 | 100.0% | 37.6% |
| 185414 | 3347.1.1.1 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 | 0.63 | 50.0 | 3.90e-01 | 87.5% | 80.4% |
| 3929256 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.60 | 54.0 | 4.18e-01 | 100.0% | 78.6% |
| 3228051 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.60 | 48.0 | 4.85e-01 | 100.0% | 86.2% |
| 5064550 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 39.0 | 3.41e-01 | 76.6% | 46.3% |
| 943 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.59 | 50.0 | 4.42e-01 | 100.0% | 77.0% |
| 4987919 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.58 | 39.0 | 4.06e-01 | 81.2% | 75.9% |
| 1811384 | 73.1.1.7 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FtsK_SpoIIIE_N | 0.58 | 41.0 | 3.75e-01 | 75.0% | 75.6% |
| 4001347 | 220.4.1.0 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins | 0.58 | 47.0 | 3.92e-01 | 90.6% | 94.8% |
| 3967584 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.58 | 51.0 | 4.77e-01 | 100.0% | 85.0% |
| 3379750 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.55 | 47.0 | 3.77e-01 | 100.0% | 57.9% |
| 3580035 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 49.0 | 3.06e-01 | 100.0% | 20.6% |
| 4029623 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 2.75e-01 | 100.0% | 15.4% |
| 3942396 | 4.1.1.412 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1062 | 0.52 | 34.0 | 3.11e-01 | 89.1% | 48.9% |
| 4945290 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 37.0 | 3.88e-01 | 89.1% | 83.3% |
| 4030120 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 44.0 | 2.65e-01 | 100.0% | 13.4% |
| 4944596 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.51 | 39.0 | 3.20e-01 | 85.9% | 63.2% |
| 3926158 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 44.0 | 3.26e-01 | 100.0% | 88.6% |
| 3251868 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.50 | 43.0 | 3.44e-01 | 100.0% | 70.0% |
| 5022868 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.50 | 34.0 | 3.10e-01 | 82.8% | 51.1% |
D2
medium
residues 109-190
Domain cluster:
rep: NC_006940.2__YP_224065.1__BPKS7gp43__00043__D230-289