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ON366411.1__USL89352.1__vBBceHLY2_00076__00076

Bact-Vir

ON366411.1__USL89352.1__vBBceHLY2_00076__00076

Identity

Accession:
ON366411 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-53
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xtlA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.69 58.0 4.66e-01 100.0% 48.5%
1t3yA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.68 50.0 3.76e-01 96.1% 31.3%
5fmvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 52.0 4.53e-01 100.0% 53.6%
1qm9A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 56.0 4.67e-01 100.0% 85.7%
2vtfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.71e-01 100.0% 54.9%
1m4jA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.66 53.0 4.02e-01 94.1% 44.4%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.64 44.0 3.03e-01 74.5% 37.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.64 52.0 4.86e-01 98.0% 74.2%
1axiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 49.0 4.07e-01 100.0% 45.5%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.64 52.0 4.96e-01 98.0% 85.7%
2w91A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 56.0 4.45e-01 100.0% 50.5%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 54.0 4.32e-01 100.0% 62.0%
5d77A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 51.0 4.46e-01 94.1% 100.0%
3gzaB02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 50.0 4.07e-01 98.0% 45.9%
3pvlA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 53.0 4.40e-01 100.0% 54.2%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 46.0 4.12e-01 98.0% 54.4%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 4.19e-01 100.0% 79.6%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 53.0 3.93e-01 100.0% 39.1%
3qjhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.16e-01 100.0% 62.6%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 48.0 4.13e-01 94.1% 57.6%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 3.85e-01 100.0% 40.6%
3au4A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 51.0 4.28e-01 100.0% 71.3%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 48.0 3.61e-01 100.0% 32.9%
2qyxA02 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.60 49.0 3.98e-01 100.0% 77.0%
2pw9C03 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.60 48.0 3.71e-01 98.0% 51.4%
2drvA00 3.30.1960.10 Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like 0.60 47.0 3.31e-01 100.0% 25.1%
4mz2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 49.0 3.98e-01 100.0% 63.1%
3zn4A00 2.60.120.1180 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 3.76e-01 100.0% 50.3%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 51.0 4.03e-01 100.0% 46.9%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.62e-01 100.0% 39.3%
2dmhA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 47.0 3.60e-01 98.0% 95.0%
2pndA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 3.81e-01 100.0% 63.0%
3f8uB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 3.72e-01 100.0% 60.3%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.06e-01 100.0% 57.7%
2a90A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.58 48.0 4.03e-01 100.0% 76.5%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.58 45.0 4.04e-01 96.1% 96.4%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 3.46e-01 96.1% 34.3%
1wscA01 3.30.700.20 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 0.57 47.0 3.52e-01 100.0% 43.6%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 3.86e-01 100.0% 48.1%
2huhA01 2.60.40.1600 Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like 0.56 44.0 3.48e-01 98.0% 36.8%
4jndA02 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 45.0 2.99e-01 100.0% 82.0%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 47.0 3.48e-01 100.0% 75.4%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.58e-01 100.0% 51.4%
2uwqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 38.0 3.44e-01 100.0% 50.0%
4p4tA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 36.0 2.28e-01 72.5% 60.0%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.39e-01 98.0% 39.3%
1e4eB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 46.0 3.28e-01 100.0% 55.8%
3zn6A01 2.60.120.1170 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.43e-01 100.0% 43.3%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 2.84e-01 98.0% 28.3%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.37e-01 100.0% 67.9%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.52 36.0 2.63e-01 100.0% 21.7%
2o0yB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.51 44.0 3.09e-01 100.0% 66.7%
1ywhC03 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.51 41.0 3.61e-01 100.0% 90.9%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.33e-01 100.0% 48.0%
3fysA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 2.88e-01 90.2% 75.8%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518750 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.73 59.0 4.72e-01 100.0% 44.8%
3402805 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 53.0 4.35e-01 100.0% 45.3%
3600913 317.1.1.0 a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase 0.69 60.0 4.25e-01 98.0% 36.3%
3761694 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.67 58.0 4.78e-01 100.0% 72.6%
3820477 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.66 56.0 4.17e-01 100.0% 47.9%
3805881 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.66 56.0 4.15e-01 100.0% 46.4%
3620456 221.1.1.64 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N 0.65 56.0 4.40e-01 100.0% 45.5%
4171352 304.110.1.4 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N 0.64 57.0 4.64e-01 100.0% 83.2%
3285516 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.64 53.0 4.62e-01 100.0% 100.0%
1240469 11.1.1.330 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GH85_C 0.63 56.0 4.45e-01 100.0% 50.5%
4048590 10.32.1.53 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like 0.63 53.0 3.70e-01 100.0% 28.6%
3489390 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 52.0 4.58e-01 96.1% 81.2%
3933905 224.1.1.1 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF 0.62 50.0 3.78e-01 96.1% 38.6%
3769452 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.04e-01 100.0% 42.6%
5027806 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.61 53.0 4.40e-01 100.0% 53.7%
4151900 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.60 49.0 3.74e-01 100.0% 41.0%
1031158 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.60 42.0 2.54e-01 74.5% 82.6%
3913739 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.60 50.0 4.07e-01 100.0% 60.9%
4024700 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.60 45.0 2.74e-01 88.2% 48.3%
5039612 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.59 49.0 3.88e-01 100.0% 44.1%
3780458 223.2.1.51 a+b three layers › Profilin-like › profilin-like › profilin-like › Njmu-R1 0.59 44.0 3.23e-01 82.4% 40.6%
4024040 822.1.1.0 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain 0.59 47.0 4.47e-01 100.0% 75.4%
3728680 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 43.0 2.43e-01 84.3% 53.9%
3941066 11.1.4.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.58 50.0 3.99e-01 100.0% 53.6%
3560843 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 49.0 3.93e-01 100.0% 50.9%
3916476 221.1.1.73 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RASSF8-10_RA 0.58 42.0 3.76e-01 100.0% 51.8%
3401013 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 49.0 3.96e-01 100.0% 53.3%
3931970 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 48.0 3.86e-01 100.0% 50.9%
3597730 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 44.0 3.13e-01 94.1% 100.0%
3923658 3519.1.1.0 beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain 0.56 48.0 3.94e-01 100.0% 90.0%
3691574 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 44.0 3.99e-01 96.1% 62.7%
3513575 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 47.0 3.75e-01 100.0% 49.6%
3878866 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 46.0 3.32e-01 100.0% 28.8%
3220695 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 48.0 3.69e-01 98.0% 46.7%
4180988 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.56 46.0 3.06e-01 100.0% 97.1%
4486687 11.2.1.62 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29106 0.56 47.0 3.30e-01 100.0% 28.3%
3242452 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 47.0 3.86e-01 100.0% 54.0%
3637444 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.56 44.0 2.97e-01 100.0% 58.4%
3925945 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 46.0 3.95e-01 100.0% 77.8%
3593026 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 47.0 3.20e-01 100.0% 40.5%
3452318 11.1.4.101 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7771 0.54 45.0 3.31e-01 100.0% 35.6%
3553704 382.1.1.1 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 0.54 43.0 3.76e-01 98.0% 95.6%
5040308 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 46.0 3.28e-01 100.0% 32.7%
1401775 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 36.0 2.28e-01 72.5% 60.0%
3743150 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.53 43.0 3.35e-01 100.0% 50.0%
5014000 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 42.0 3.24e-01 96.1% 74.1%
4464582 11.2.1.62 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29106 0.52 44.0 3.11e-01 100.0% 29.2%
3993062 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.41e-01 100.0% 56.5%
4162583 11.2.1.62 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF29106 0.52 43.0 3.09e-01 100.0% 30.9%
2527965 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.52 42.0 3.16e-01 100.0% 47.3%
3233763 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.43e-01 100.0% 53.9%
3521256 11.1.1.877 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, MG2, A2M_BRD, MG4 0.51 43.0 2.47e-01 100.0% 9.4%