←Back to structures

ON366411.1__USL89399.1__vBBceHLY2_00123__00123

Bact-Vir

ON366411.1__USL89399.1__vBBceHLY2_00123__00123

Identity

Accession:
ON366411 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Bacillus_phage_vB_BceH_LY2

TaxID: 2950457

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-160
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 27.0 3.37e-01 74.6% 80.5%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.52 28.0 2.99e-01 85.9% 56.8%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.52 33.0 3.65e-01 85.9% 81.3%
5tpmB00 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.52 35.0 3.61e-01 96.5% 70.2%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.52 28.0 3.34e-01 98.6% 78.0%
5hexA01 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.52 42.0 3.45e-01 89.4% 89.2%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.51 34.0 3.67e-01 86.6% 82.1%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.51 27.0 3.18e-01 73.2% 72.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3289996 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.63 30.0 3.11e-01 70.4% 45.2%
3405043 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 46.0 2.98e-01 91.5% 98.0%
4022400 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.55 46.0 3.00e-01 92.3% 98.0%
3365375 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.53 44.0 2.87e-01 90.8% 97.6%
5057940 1075.5.1.4 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt 0.52 32.0 2.86e-01 89.4% 40.5%
4033102 632.5.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylocoagulase › Staphylocoagulase 0.52 28.0 3.26e-01 95.8% 73.7%
3472115 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.51 34.0 3.56e-01 87.3% 75.2%
D2 high residues 173-286
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.68 46.0 3.89e-01 99.1% 42.9%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.53 39.0 3.89e-01 77.2% 84.4%
2ebkA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.53 40.0 3.86e-01 100.0% 70.3%
1x7dB01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.52 43.0 3.84e-01 92.1% 68.6%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 4.30e-01 90.4% 97.0%
1wzvA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.50 38.0 3.49e-01 100.0% 60.7%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969815 4210.1.1.5 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › PA4575 0.72 43.0 4.63e-01 91.2% 68.0%
3275455 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.71 46.0 4.55e-01 88.6% 62.5%
4058525 4142.1.1.1 ↗ a+b two layers › YehR-like › YehR-like › YehR-like › DUF1307 0.62 43.0 4.16e-01 70.2% 92.0%
3168414 4099.1.1.46 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF30283 0.58 35.0 3.46e-01 83.3% 56.0%
3575045 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.56 47.0 3.42e-01 92.1% 39.4%
3599539 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.53 48.0 4.22e-01 100.0% 81.8%
3476986 216.1.1.1 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.52 43.0 3.75e-01 89.5% 92.0%
3238125 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 39.0 2.56e-01 78.1% 33.9%
3626775 216.1.1.1 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.51 37.0 3.34e-01 100.0% 53.3%