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ON366411.1__USL89434.1__vBBceHLY2_00158__00158

Bact-Vir

ON366411.1__USL89434.1__vBBceHLY2_00158__00158

Identity

Accession:
ON366411 ↗
Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-74
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 55.0 5.93e-01 100.0% 94.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 5.41e-01 100.0% 88.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.73 46.0 5.23e-01 80.0% 91.3%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 48.0 5.18e-01 100.0% 84.6%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 51.0 4.43e-01 100.0% 50.0%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 51.0 4.75e-01 100.0% 59.0%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 49.0 5.43e-01 100.0% 92.2%
1wjsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 4.10e-01 100.0% 39.4%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.70 61.0 4.29e-01 100.0% 33.6%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 52.0 4.25e-01 78.5% 66.1%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 45.0 5.03e-01 96.9% 89.6%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 47.0 4.21e-01 100.0% 50.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 51.0 3.61e-01 80.0% 69.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 4.92e-01 100.0% 77.4%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 46.0 4.83e-01 100.0% 78.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.68 51.0 4.12e-01 80.0% 71.3%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 57.0 4.31e-01 100.0% 39.3%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.67 54.0 3.76e-01 100.0% 27.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 46.0 4.94e-01 100.0% 85.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 4.79e-01 100.0% 65.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.92e-01 100.0% 84.2%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.66 56.0 4.03e-01 100.0% 97.6%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.65 55.0 4.53e-01 100.0% 93.2%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 46.0 4.92e-01 100.0% 96.1%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.81e-01 100.0% 75.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.64 44.0 3.86e-01 100.0% 48.0%
3p02A02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.63 53.0 4.09e-01 100.0% 85.1%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.62 55.0 3.92e-01 100.0% 81.5%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 43.0 4.47e-01 100.0% 80.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 44.0 4.48e-01 100.0% 79.4%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 45.0 3.79e-01 80.0% 87.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 45.0 4.46e-01 100.0% 77.6%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.16e-01 100.0% 87.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.59e-01 100.0% 91.5%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.48e-01 100.0% 84.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.58 40.0 4.08e-01 100.0% 72.7%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.25e-01 90.8% 85.4%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 44.0 3.63e-01 100.0% 46.2%
4bfmA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.57 45.0 2.91e-01 87.7% 93.3%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.13e-01 100.0% 78.7%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 47.0 4.45e-01 100.0% 79.5%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 2.99e-01 100.0% 28.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 43.0 4.27e-01 100.0% 85.1%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.73e-01 100.0% 96.2%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.87e-01 100.0% 64.4%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 46.0 4.16e-01 98.5% 87.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.53 47.0 3.38e-01 100.0% 72.9%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.44e-01 100.0% 90.1%
3rqbA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.53 38.0 2.62e-01 78.5% 67.8%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.53 46.0 3.43e-01 100.0% 77.7%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 43.0 3.05e-01 96.9% 75.8%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 38.0 3.05e-01 78.5% 88.7%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.51 43.0 3.70e-01 100.0% 74.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.72e-01 100.0% 77.8%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033600 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 50.0 5.71e-01 76.9% 81.6%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.80 58.0 6.06e-01 100.0% 83.3%
3553983 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.78 57.0 5.93e-01 100.0% 83.3%
3616007 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.78 55.0 5.89e-01 100.0% 87.3%
3217770 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 57.0 4.86e-01 100.0% 50.0%
3484822 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.77 54.0 5.07e-01 100.0% 60.0%
3992688 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.74 55.0 4.01e-01 100.0% 30.9%
4995678 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.38e-01 100.0% 83.6%
3414063 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.73 51.0 5.47e-01 100.0% 87.3%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 54.0 3.74e-01 78.5% 35.5%
3930366 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.61e-01 100.0% 86.7%
3270324 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 49.0 5.37e-01 100.0% 92.0%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 48.0 5.21e-01 100.0% 83.6%
3611892 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.71 53.0 3.75e-01 78.5% 41.6%
4984882 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 50.0 4.88e-01 100.0% 68.6%
3941170 4.1.1.237 beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.70 54.0 5.28e-01 100.0% 77.1%
3213725 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.69 51.0 3.35e-01 78.5% 32.1%
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 51.0 5.00e-01 100.0% 72.9%
3941004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.82e-01 100.0% 65.0%
3368864 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 51.0 5.20e-01 100.0% 81.5%
4101502 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 46.0 5.01e-01 100.0% 85.2%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 46.0 4.22e-01 100.0% 54.1%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.68 50.0 3.45e-01 78.5% 35.3%
4937587 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 51.0 3.84e-01 100.0% 32.7%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.65 48.0 4.43e-01 100.0% 60.0%
3251940 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.65 47.0 4.48e-01 100.0% 65.3%
3514556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.63e-01 100.0% 71.4%
4024240 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.57e-01 100.0% 66.3%
3342793 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 55.0 3.95e-01 100.0% 32.6%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 55.0 5.07e-01 100.0% 72.9%
3476221 2498.1.1.14 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.64 55.0 3.30e-01 100.0% 13.8%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.51e-01 100.0% 71.4%
3313139 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 56.0 4.12e-01 100.0% 41.1%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 47.0 4.81e-01 100.0% 82.5%
3448643 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 57.0 3.96e-01 100.0% 53.7%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 55.0 4.89e-01 100.0% 74.7%
3473464 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 47.0 3.44e-01 100.0% 31.7%
3356605 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 54.0 4.91e-01 100.0% 77.8%
3834112 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 55.0 5.11e-01 100.0% 88.7%
3630782 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.61 51.0 3.93e-01 100.0% 41.4%
3600139 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.44e-01 100.0% 58.2%
3436557 220.4.1.8 beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N 0.61 52.0 5.01e-01 100.0% 93.3%
490 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 45.0 4.32e-01 100.0% 70.3%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.60 53.0 5.00e-01 100.0% 87.5%
4335951 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 47.0 4.57e-01 100.0% 75.3%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 44.0 4.27e-01 100.0% 69.9%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.51e-01 100.0% 69.4%
3947700 4.8.1.25 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB 0.60 46.0 4.71e-01 100.0% 92.1%
3601070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.81e-01 100.0% 89.2%
4016602 4.1.1.179 beta barrels › SH3 › SH3 › SH3 › DUF6590 0.59 52.0 4.07e-01 100.0% 75.5%
4282868 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 47.0 4.58e-01 100.0% 78.6%
3507003 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.87e-01 100.0% 85.3%
3611570 206.1.1.87 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 0.58 45.0 2.97e-01 84.6% 27.9%
5019488 5090.1.1.6 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer 0.58 46.0 3.62e-01 89.2% 86.0%
3510681 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.76e-01 100.0% 94.7%
3595833 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 47.0 4.13e-01 100.0% 61.1%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.54e-01 100.0% 80.0%
3599019 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 48.0 4.10e-01 100.0% 91.3%
5039349 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.80e-01 100.0% 96.7%
3269834 220.1.1.95 beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.56 47.0 3.94e-01 100.0% 66.4%
3449728 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.56 44.0 2.93e-01 89.2% 28.4%
3632407 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 48.0 4.06e-01 100.0% 67.5%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.56 45.0 4.21e-01 100.0% 70.6%
3719783 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 49.0 4.36e-01 100.0% 74.5%
3959770 4.31.1.0 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 0.55 45.0 4.12e-01 100.0% 66.7%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.38e-01 100.0% 80.0%
3634475 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.56e-01 100.0% 90.0%
3225816 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 46.0 4.54e-01 100.0% 88.6%
3693741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.49e-01 100.0% 89.9%
4444916 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 2.83e-01 100.0% 21.6%
3718664 4113.1.1.1 beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.54 47.0 3.33e-01 100.0% 71.6%
3959465 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.53 47.0 3.76e-01 100.0% 60.8%
3230400 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.34e-01 100.0% 92.3%
3224710 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.52 42.0 4.12e-01 100.0% 84.0%
3763497 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.52 44.0 4.27e-01 100.0% 82.7%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.51 42.0 3.59e-01 100.0% 55.5%
4026653 220.1.1.11 beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.51 42.0 3.71e-01 100.0% 76.4%
5010832 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.51 43.0 3.98e-01 100.0% 71.9%
3576443 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 42.0 4.16e-01 100.0% 88.6%
D2 medium residues 78-118
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 50.0 3.93e-01 95.1% 40.2%