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ON366412.2__USL89541.1__vBBcePLY3_00030__00030
Bact-VirON366412.2__USL89541.1__vBBcePLY3_00030__00030
Identity
- Accession:
- ON366412 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Salasmaviridae›
Layangcvirus›
Bacillus_phage_vB_BceP_LY3
TaxID: 2950458
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 57.0 | 5.49e-01 | 77.1% | 63.6% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 54.0 | 5.12e-01 | 77.1% | 60.3% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.77 | 69.0 | 5.30e-01 | 100.0% | 74.8% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.73 | 62.0 | 6.20e-01 | 100.0% | 94.0% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 61.0 | 5.26e-01 | 100.0% | 59.5% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 58.0 | 5.22e-01 | 100.0% | 65.2% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.71 | 48.0 | 3.64e-01 | 81.2% | 28.2% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 52.0 | 5.33e-01 | 100.0% | 83.0% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 57.0 | 4.63e-01 | 87.5% | 77.4% |
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.69 | 55.0 | 5.35e-01 | 97.9% | 80.0% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 57.0 | 4.24e-01 | 100.0% | 67.7% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.67 | 47.0 | 4.11e-01 | 75.0% | 73.0% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 50.0 | 4.63e-01 | 83.3% | 100.0% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 58.0 | 4.90e-01 | 100.0% | 67.1% |
| 1wh5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 51.0 | 4.49e-01 | 100.0% | 53.8% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.66 | 54.0 | 4.30e-01 | 97.9% | 44.6% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.66 | 49.0 | 3.94e-01 | 83.3% | 40.6% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 54.0 | 5.06e-01 | 89.6% | 82.8% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.65 | 47.0 | 5.00e-01 | 97.9% | 92.7% |
| 5z62E00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.65 | 55.0 | 4.32e-01 | 100.0% | 45.0% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.63e-01 | 91.7% | 74.7% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 56.0 | 4.92e-01 | 100.0% | 83.3% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 54.0 | 4.44e-01 | 97.9% | 75.0% |
| 7ar7E01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.62 | 50.0 | 4.68e-01 | 95.8% | 79.4% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.62 | 50.0 | 4.28e-01 | 100.0% | 70.8% |
| 3t5qG01 | 1.10.150.550 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain | 0.61 | 53.0 | 4.14e-01 | 97.9% | 78.8% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 53.0 | 4.73e-01 | 100.0% | 90.1% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.61 | 52.0 | 4.69e-01 | 100.0% | 81.4% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.59e-01 | 100.0% | 68.2% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.61 | 44.0 | 4.16e-01 | 77.1% | 69.0% |
| 2f4qA02 | 1.10.132.120 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.61 | 52.0 | 3.90e-01 | 100.0% | 43.3% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 50.0 | 4.16e-01 | 97.9% | 80.6% |
| 2y2wC02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 49.0 | 2.95e-01 | 93.8% | 59.3% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.60 | 47.0 | 3.64e-01 | 89.6% | 83.8% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 51.0 | 4.56e-01 | 100.0% | 73.2% |
| 2x26A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 51.0 | 3.43e-01 | 100.0% | 72.4% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 44.0 | 3.92e-01 | 89.6% | 67.1% |
| 4h9nC00 | 1.20.58.2170 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 49.0 | 3.24e-01 | 97.9% | 25.9% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 47.0 | 3.15e-01 | 95.8% | 30.5% |
| 2de2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 50.0 | 3.29e-01 | 100.0% | 49.5% |
| 2hyjA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 46.0 | 4.74e-01 | 97.9% | 97.8% |
| 2i6hA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 44.0 | 3.67e-01 | 95.8% | 47.9% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.54 | 46.0 | 3.15e-01 | 100.0% | 37.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941960 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.86 | 65.0 | 4.69e-01 | 81.2% | 32.0% |
| 4520778 | 186.1.1.20 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › SwrA | 0.79 | 69.0 | 5.55e-01 | 100.0% | 51.6% |
| 4989349 | 633.16.1.0 ↗ | alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like | 0.79 | 67.0 | 6.25e-01 | 95.8% | 76.7% |
| 3743752 | 192.15.1.1 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 | 0.77 | 66.0 | 5.44e-01 | 95.8% | 85.9% |
| 4945647 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.76 | 66.0 | 5.18e-01 | 97.9% | 89.0% |
| 3724867 | 192.15.1.1 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 | 0.76 | 66.0 | 5.15e-01 | 97.9% | 74.0% |
| 3979215 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 62.0 | 5.97e-01 | 97.9% | 81.8% |
| 3963650 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 58.0 | 5.77e-01 | 97.9% | 84.0% |
| 5049361 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.75 | 65.0 | 5.54e-01 | 100.0% | 87.5% |
| 1546185 | 2499.2.1.3 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › T6SS_VipA | 0.74 | 63.0 | 5.47e-01 | 100.0% | 65.8% |
| 3742245 | 109.4.1.1276 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR | 0.74 | 58.0 | 3.76e-01 | 87.5% | 25.9% |
| 3254019 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.74 | 59.0 | 4.14e-01 | 100.0% | 27.5% |
| 5043291 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.74 | 64.0 | 5.47e-01 | 100.0% | 98.8% |
| 3704188 | 192.15.1.1 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › VPS28 | 0.74 | 63.0 | 5.09e-01 | 97.9% | 80.0% |
| 2796737 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.73 | 57.0 | 5.28e-01 | 97.9% | 67.7% |
| 3398490 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.72 | 59.0 | 5.43e-01 | 100.0% | 70.8% |
| 3266463 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 57.0 | 5.51e-01 | 100.0% | 78.2% |
| 3484930 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.71 | 52.0 | 4.14e-01 | 81.2% | 37.1% |
| 3404621 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.71 | 60.0 | 5.01e-01 | 100.0% | 54.4% |
| 3390891 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.70 | 59.0 | 4.93e-01 | 100.0% | 55.6% |
| 3575981 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.70 | 61.0 | 5.15e-01 | 97.9% | 86.3% |
| 3711858 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 61.0 | 4.53e-01 | 100.0% | 78.4% |
| 4995688 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 5.11e-01 | 97.9% | 74.5% |
| 3173846 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 3.94e-01 | 100.0% | 34.6% |
| 4992012 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 57.0 | 5.28e-01 | 97.9% | 75.0% |
| 4990095 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.67 | 56.0 | 4.77e-01 | 100.0% | 74.1% |
| 4986733 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.67 | 54.0 | 3.21e-01 | 100.0% | 10.8% |
| 3268175 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.66 | 49.0 | 4.20e-01 | 79.2% | 100.0% |
| 3432510 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.66 | 54.0 | 5.04e-01 | 97.9% | 80.0% |
| 4395930 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.65 | 55.0 | 3.54e-01 | 100.0% | 19.2% |
| 4012120 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 51.0 | 3.44e-01 | 97.9% | 41.8% |
| 4933603 | 101.8.1.0 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases | 0.64 | 52.0 | 3.77e-01 | 100.0% | 31.0% |
| 4185536 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.64 | 55.0 | 3.15e-01 | 100.0% | 9.3% |
| 3485513 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 49.0 | 3.54e-01 | 97.9% | 43.4% |
| 4017461 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.61 | 53.0 | 4.20e-01 | 97.9% | 51.0% |
| 4955389 | 101.1.1.542 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF790 | 0.61 | 50.0 | 4.85e-01 | 95.8% | 81.8% |
| 4309485 | 4229.1.1.2 ↗ | alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Trp_dioxygenase | 0.61 | 49.0 | 2.98e-01 | 95.8% | 81.4% |
| 3608092 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 3.50e-01 | 100.0% | 36.6% |
| 4989131 | 7523.1.1.11 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth | 0.58 | 48.0 | 3.32e-01 | 100.0% | 74.4% |