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ON366412.2__USL89547.1__vBBcePLY3_00036__00036

Bact-Vir

ON366412.2__USL89547.1__vBBcePLY3_00036__00036

Identity

Accession:
ON366412 ↗
Kingdom:
phage

Quality

78.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salasmaviridae› Layangcvirus› Bacillus_phage_vB_BceP_LY3

TaxID: 2950458

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 128-169
PDB
Domain cluster: rep: ON107264.1__UOX38297.1__X__00159__D5-50
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n3fA01 3.40.1620.70 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.77 62.0 6.25e-01 92.9% 93.0%
3hshE00 3.40.1620.70 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.73 59.0 5.59e-01 100.0% 78.2%
4bndA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 60.0 4.16e-01 100.0% 32.1%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.71 51.0 3.86e-01 90.5% 31.1%
1yu0A01 2.10.10.30 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.71 60.0 5.72e-01 100.0% 82.4%
3td9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 57.0 3.95e-01 100.0% 27.8%
2zosB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.66 55.0 3.79e-01 100.0% 34.6%
3fveA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.66 52.0 3.84e-01 95.2% 47.3%
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 55.0 3.76e-01 100.0% 29.9%
5swcD00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.65 53.0 3.41e-01 95.2% 52.4%
1sb2B00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.65 54.0 4.00e-01 100.0% 74.2%
2fb5A02 3.40.1700.10 Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain 0.64 51.0 3.76e-01 100.0% 85.6%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 48.0 2.98e-01 92.9% 90.7%
1uoyA01 2.30.130.50 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.63 51.0 4.75e-01 100.0% 71.9%
3u50C01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 3.65e-01 97.6% 95.3%
1xezA01 3.30.110.130 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain 0.62 51.0 4.29e-01 100.0% 92.6%
1ym5A01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.62 48.0 3.56e-01 97.6% 44.9%
1wr8A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.62 48.0 3.38e-01 100.0% 24.8%
1ni5A02 1.20.59.20 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › 0.61 47.0 3.91e-01 92.9% 46.5%
1goiA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 42.0 3.37e-01 76.2% 88.9%
3tw8A02 3.40.50.11500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DENN domain, C-terminal lobe 0.60 42.0 2.89e-01 76.2% 49.4%
4dunA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.59 45.0 3.46e-01 97.6% 48.0%
3mqgA02 2.20.70.110 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.59 43.0 4.39e-01 85.7% 94.9%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.59 43.0 3.48e-01 83.3% 56.0%
3e7wA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.58 44.0 2.59e-01 88.1% 18.6%
1a0rB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.74e-01 97.6% 82.6%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.57 45.0 3.75e-01 100.0% 59.3%
3oa5A01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 46.0 3.31e-01 95.2% 53.0%
4paaA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.56 45.0 3.15e-01 100.0% 60.6%
1g3pA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.55 43.0 3.41e-01 88.1% 56.8%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 40.0 2.66e-01 81.0% 46.2%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.72e-01 100.0% 25.5%
4dw8A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 43.0 3.08e-01 100.0% 28.7%
6nobA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 43.0 2.59e-01 100.0% 32.7%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 37.0 3.24e-01 83.3% 82.4%
3nycA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.50 39.0 2.87e-01 100.0% 66.7%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405960 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.83 70.0 7.02e-01 95.2% 95.3%
3528795 3761.1.1.0 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.83 70.0 6.92e-01 100.0% 88.9%
3900165 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.82 71.0 7.13e-01 100.0% 100.0%
3623217 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.80 69.0 6.58e-01 100.0% 86.0%
3917719 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.79 67.0 6.62e-01 100.0% 95.6%
3989854 3761.1.1.4 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › CFSR 0.78 63.0 5.06e-01 100.0% 45.9%
3989853 77.1.1.13 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › CFSR 0.77 61.0 3.63e-01 100.0% 12.1%
1281772 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.76 65.0 6.08e-01 100.0% 79.6%
3987740 3761.1.1.0 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.76 60.0 6.09e-01 97.6% 95.0%
4632068 4126.1.1.6 ↗ a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA 0.75 61.0 3.80e-01 95.2% 20.8%
1505155 3761.1.1.2 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer 0.75 60.0 5.67e-01 100.0% 76.8%
4206587 2007.1.2.47 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DabA 0.74 61.0 4.13e-01 100.0% 29.7%
4419934 4126.1.1.6 ↗ a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA 0.74 59.0 3.75e-01 95.2% 21.9%
4032112 2006.1.1.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.71 59.0 3.67e-01 100.0% 18.5%
4946362 2492.1.1.0 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.71 60.0 3.92e-01 100.0% 28.4%
1107990 3761.1.1.1 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N 0.71 60.0 5.76e-01 100.0% 84.0%
5002640 3761.1.1.1 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N 0.70 59.0 5.67e-01 100.0% 92.0%
4201251 2006.1.1.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.70 57.0 3.52e-01 100.0% 17.5%
3407018 391.1.2.11 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.69 51.0 4.56e-01 88.1% 56.7%
3474295 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.68 56.0 3.56e-01 100.0% 38.7%
4279233 4126.1.1.6 ↗ a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA 0.68 54.0 3.40e-01 100.0% 19.3%
5079606 286.1.1.1 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.68 56.0 3.88e-01 100.0% 39.0%
3613385 220.1.1.21 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SPT16 0.67 47.0 3.47e-01 90.5% 26.4%
3960379 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.67 54.0 4.42e-01 100.0% 70.0%
3967702 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.65 53.0 3.94e-01 100.0% 50.4%
4263214 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 53.0 4.85e-01 100.0% 96.7%
5012372 2006.1.1.11 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.65 50.0 3.57e-01 100.0% 26.7%
4183358 2006.1.1.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.65 50.0 3.57e-01 100.0% 26.7%
3727830 2006.1.1.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.65 51.0 3.40e-01 100.0% 20.0%
4973737 2006.1.1.7 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.64 52.0 3.34e-01 100.0% 18.8%
3738179 2006.1.1.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.64 51.0 3.45e-01 100.0% 23.7%
5079980 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 51.0 3.43e-01 100.0% 24.7%
3545467 391.1.2.10 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st 0.63 45.0 4.62e-01 88.1% 85.0%
3460175 2006.1.1.3 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.63 51.0 3.43e-01 100.0% 22.6%
3788958 825.1.1.0 ↗ beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins 0.63 51.0 3.44e-01 100.0% 32.0%
4198047 391.1.1.5 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa 0.63 45.0 4.61e-01 81.0% 87.5%
3893040 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 46.0 4.53e-01 81.0% 82.2%
4881091 286.1.1.5 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N 0.61 47.0 3.66e-01 97.6% 54.7%
4184388 2006.1.1.11 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.60 48.0 3.37e-01 100.0% 25.5%
5061811 2006.1.1.11 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.59 47.0 3.34e-01 100.0% 25.5%
5030937 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 41.0 2.52e-01 78.6% 32.9%
3709300 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 45.0 2.53e-01 100.0% 45.5%
3386607 286.1.1.1 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.57 47.0 3.56e-01 100.0% 67.0%
4055607 244.1.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO 0.57 47.0 3.28e-01 100.0% 65.2%
4046575 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.56 42.0 3.35e-01 97.6% 50.4%
4477489 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.56 44.0 3.23e-01 100.0% 66.2%
3618501 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.55 45.0 3.60e-01 90.5% 72.9%
4127691 286.1.1.1 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.55 45.0 3.45e-01 100.0% 73.0%
5006277 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.54 41.0 3.95e-01 85.7% 98.0%
3524157 5.1.4.628 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WDR90_beta-prop_4th 0.54 43.0 2.64e-01 100.0% 84.7%
3973416 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 43.0 2.60e-01 100.0% 88.3%
3927767 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 43.0 2.54e-01 100.0% 88.1%
4406456 2002.1.1.121 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.52 42.0 2.59e-01 100.0% 30.3%
3475247 4184.1.1.1 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.52 44.0 3.75e-01 100.0% 58.6%
3201457 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.51 36.0 3.13e-01 81.0% 86.7%
D2 high residues 186-278
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.75 52.0 5.52e-01 79.6% 81.7%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.70 42.0 4.30e-01 88.2% 62.2%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 4.04e-01 91.4% 82.2%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 3.98e-01 91.4% 81.6%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 4.16e-01 91.4% 77.9%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 3.96e-01 91.4% 82.1%
1y4wA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 53.0 3.63e-01 100.0% 53.0%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.59 51.0 4.42e-01 94.6% 70.9%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.59 47.0 4.51e-01 92.5% 76.4%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 51.0 3.55e-01 100.0% 51.5%
1jofA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.49e-01 100.0% 36.4%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.58 54.0 3.67e-01 100.0% 93.8%
1wz9A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 43.0 3.73e-01 79.6% 73.9%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.57 51.0 3.45e-01 100.0% 39.7%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 48.0 4.18e-01 94.6% 64.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.57 41.0 3.96e-01 75.3% 75.0%
1qhwA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.57 47.0 3.31e-01 91.4% 97.7%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 42.0 3.59e-01 78.5% 63.8%
3stoA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 42.0 3.64e-01 79.6% 74.0%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.56 49.0 4.62e-01 100.0% 79.6%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 47.0 4.02e-01 92.5% 59.5%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 42.0 3.46e-01 81.7% 79.3%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.55 50.0 4.32e-01 98.9% 72.0%
2qg7B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 47.0 4.62e-01 93.5% 100.0%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 40.0 4.15e-01 92.5% 83.9%
1dceA02 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.54 44.0 4.24e-01 84.9% 92.2%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 46.0 3.84e-01 92.5% 55.7%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 40.0 3.28e-01 91.4% 43.4%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 4.18e-01 79.6% 92.9%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 48.0 3.44e-01 100.0% 39.7%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.53 46.0 3.01e-01 100.0% 39.5%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.81e-01 92.5% 78.0%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 47.0 3.45e-01 100.0% 41.9%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.52 44.0 3.71e-01 97.8% 93.0%
3kb5A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 43.0 3.41e-01 91.4% 71.0%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 41.0 3.56e-01 84.9% 57.9%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 43.0 3.78e-01 89.2% 99.2%
1uuzB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.51 42.0 3.81e-01 100.0% 65.6%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.57e-01 92.5% 79.4%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 44.0 3.09e-01 100.0% 41.3%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.50 46.0 4.12e-01 100.0% 77.3%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 36.0 3.05e-01 97.8% 43.1%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342741 243.19.1.3 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N 0.90 71.0 7.46e-01 98.9% 89.4%
4221174 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.80 69.0 6.92e-01 100.0% 89.5%
4404709 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.80 49.0 3.88e-01 80.6% 32.6%
4100839 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.79 41.0 5.49e-01 80.6% 96.0%
3984944 213.2.1.0 ↗ a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.75 46.0 4.85e-01 79.6% 68.2%
5054384 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.75 45.0 5.12e-01 86.0% 80.0%
2538670 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.73 40.0 5.01e-01 80.6% 92.6%
4927537 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 49.0 3.64e-01 72.0% 48.9%
3229482 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.67 42.0 3.26e-01 79.6% 28.8%
3510918 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 52.0 4.58e-01 91.4% 57.8%
4293129 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.65 55.0 4.00e-01 91.4% 73.6%
5037626 5.1.10.18 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › FG-GAP_3 0.65 36.0 3.76e-01 72.0% 57.6%
4425437 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.65 55.0 3.89e-01 91.4% 69.1%
4937307 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 55.0 4.30e-01 91.4% 76.3%
5003245 243.8.1.0 ↗ a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein 0.64 40.0 4.51e-01 80.6% 84.3%
3404871 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.64 48.0 4.55e-01 78.5% 100.0%
3630390 5.1.4.271 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.61 54.0 3.69e-01 100.0% 38.3%
3388787 719.1.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.61 47.0 4.23e-01 80.6% 97.6%
4059006 9.9.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB 0.61 40.0 3.64e-01 77.4% 49.6%
3486812 101.1.12.3 ↗ alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.61 47.0 3.89e-01 80.6% 96.1%
3264765 246.2.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases 0.59 49.0 3.48e-01 90.3% 87.8%
3272884 71.1.1.16 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin_amoebozoa 0.59 44.0 3.51e-01 80.6% 39.5%
3908724 71.1.1.1 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.59 40.0 3.29e-01 79.6% 36.7%
3391005 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 52.0 3.56e-01 100.0% 55.0%
4583801 77.1.1.1 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.58 44.0 3.23e-01 92.5% 30.2%
3269863 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.58 48.0 3.16e-01 89.2% 70.4%
3929900 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.58 51.0 3.28e-01 100.0% 57.7%
5052931 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 51.0 3.40e-01 100.0% 57.2%
3241605 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 50.0 3.56e-01 100.0% 59.4%
3242469 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.22e-01 100.0% 45.5%
1563554 10.1.1.53 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › G7C_C 0.57 51.0 4.06e-01 100.0% 97.4%
3282980 246.2.1.8 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PhoD 0.57 48.0 3.18e-01 91.4% 89.7%
3616631 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.21e-01 100.0% 52.7%
3277064 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 43.0 3.51e-01 100.0% 43.5%
3925780 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.57 49.0 3.29e-01 95.7% 26.3%
1724304 9.1.1.30 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_like 0.56 45.0 4.40e-01 92.5% 78.6%
3929563 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.56 49.0 3.35e-01 100.0% 42.7%
3737401 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 34.0 3.50e-01 79.6% 62.2%
3929846 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 48.0 3.36e-01 94.6% 31.2%
4964630 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.56 47.0 4.07e-01 91.4% 60.1%
3930913 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.56 49.0 3.40e-01 100.0% 78.2%
3616213 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 44.0 3.20e-01 87.1% 44.4%
3480143 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.55 49.0 4.18e-01 98.9% 75.3%
3421545 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.54 46.0 3.14e-01 97.8% 41.3%
3218632 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.54 44.0 4.42e-01 98.9% 86.2%
3635423 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.53 46.0 3.69e-01 94.6% 50.3%
3599881 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 45.0 3.83e-01 91.4% 84.1%
3642347 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.52 42.0 2.84e-01 88.2% 96.1%
3831579 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 47.0 3.21e-01 100.0% 44.8%
3718566 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.51 40.0 2.65e-01 82.8% 59.6%
3244937 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 44.0 3.25e-01 100.0% 49.6%
3973684 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.51 38.0 3.37e-01 79.6% 84.4%
3813951 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.50 45.0 3.82e-01 98.9% 70.3%
3744781 109.4.1.69 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IKI3 0.50 44.0 3.16e-01 100.0% 91.0%
3610987 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.50 41.0 3.75e-01 90.3% 95.2%
D3 high residues 287-409
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.66 36.0 4.40e-01 87.8% 80.2%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.65 32.0 3.75e-01 74.0% 64.4%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 32.0 4.27e-01 75.6% 93.7%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 34.0 4.40e-01 81.3% 100.0%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.62 32.0 4.10e-01 77.2% 87.1%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 31.0 4.02e-01 89.4% 93.9%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 49.0 3.61e-01 91.9% 81.7%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 45.0 3.83e-01 80.5% 79.5%
1d1jB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 39.0 3.76e-01 76.4% 64.0%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 41.0 3.18e-01 77.2% 90.7%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 39.0 3.43e-01 71.5% 92.0%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.85e-01 92.7% 69.3%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.53 40.0 4.28e-01 98.4% 92.4%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.52 35.0 3.80e-01 82.9% 82.8%
7bysA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.34e-01 91.9% 68.9%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 45.0 3.33e-01 96.7% 61.4%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 3.27e-01 93.5% 64.2%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 46.0 3.37e-01 100.0% 93.4%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.51 41.0 3.54e-01 82.9% 58.2%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 45.0 3.41e-01 100.0% 89.6%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.51 41.0 4.37e-01 100.0% 99.0%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.50 43.0 3.19e-01 95.9% 65.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4342741 243.19.1.3 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N 0.86 58.0 6.98e-01 86.2% 100.0%
5054384 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.70 37.0 4.85e-01 70.7% 91.4%
5038443 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 37.0 4.58e-01 77.2% 84.0%
4963006 4.1.1.490 ↗ beta barrels › SH3 › SH3 › SH3 › PF26269 0.66 41.0 4.75e-01 70.7% 89.4%
1249950 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.63 38.0 4.44e-01 91.9% 86.9%
5003245 243.8.1.0 ↗ a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein 0.63 36.0 4.65e-01 90.2% 100.0%
1171961 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.62 33.0 4.43e-01 90.2% 100.0%
1140833 809.2.1.1 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like 0.62 35.0 4.25e-01 81.3% 90.4%
4276409 5.1.4.352 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28370 0.60 51.0 3.31e-01 91.9% 89.3%
4969245 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 49.0 4.51e-01 86.2% 87.7%
2573861 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.58 43.0 4.43e-01 75.6% 99.1%
4494049 5.1.4.35 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.58 53.0 3.75e-01 100.0% 82.1%
1724304 9.1.1.30 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_like 0.58 44.0 4.74e-01 97.6% 95.1%
3241605 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 46.0 3.48e-01 88.6% 59.4%
3282980 246.2.1.8 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › PhoD 0.56 44.0 3.12e-01 82.9% 98.9%
3258869 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 43.0 3.93e-01 83.7% 81.8%
5072772 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.55 47.0 4.06e-01 94.3% 77.0%
3929507 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 39.0 4.43e-01 89.4% 95.8%
5009473 243.3.1.77 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Ta0938 0.55 43.0 4.59e-01 88.6% 97.1%
4996016 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.55 47.0 4.34e-01 94.3% 99.4%
4025955 5.1.4.271 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.54 46.0 3.18e-01 91.9% 84.2%
4334199 77.1.1.1 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.54 40.0 4.02e-01 95.9% 76.0%
4031410 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.54 44.0 3.91e-01 87.8% 83.9%
5037531 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 47.0 3.00e-01 97.6% 32.1%
3602148 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.95e-01 73.2% 86.0%
3626480 331.10.1.1 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.53 41.0 3.13e-01 84.6% 90.3%
3483545 4291.1.1.0 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein 0.52 42.0 2.94e-01 85.4% 54.6%
3514632 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.52 44.0 3.14e-01 91.9% 98.2%
3933425 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 43.0 4.48e-01 95.9% 94.8%
3929071 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 43.0 4.34e-01 95.9% 87.2%
3623756 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.52 42.0 3.68e-01 86.2% 77.6%
1227254 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.52 45.0 3.39e-01 96.7% 65.4%
3060582 5.1.4.58 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF5074 0.52 46.0 3.38e-01 99.2% 73.4%
3661144 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 44.0 3.23e-01 92.7% 91.6%
3229434 5.1.3.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.51 46.0 3.43e-01 98.4% 82.6%
3523446 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.51 32.0 3.53e-01 97.6% 77.0%
3536769 5.1.4.57 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PALB2_WD40 0.51 46.0 3.29e-01 100.0% 84.6%
185095 6057.1.1.1 ↗ beta sandwiches › Uncharacterized protein BAS0735 › Uncharacterized protein BAS0735 › Uncharacterized protein BAS0735 › DUF3238 0.50 37.0 3.25e-01 78.0% 76.8%
3653889 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 44.0 3.26e-01 97.6% 65.3%
3937722 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 41.0 4.23e-01 95.1% 90.8%
3240119 243.1.1.75 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.50 40.0 4.30e-01 86.2% 98.1%
D4 medium residues 34-120
PDB
Domain cluster: representative
D5 medium residues 417-516_705-755
PDB
Domain cluster: rep: NC_055866.1__YP_010110035.1__KNV24_gp23__00023__D189-309_449-521
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00149.34 best Metallophos 34.6 3.70e-08 94.0% 47.4%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ymbA00 3.30.870.30 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain 0.56 46.0 4.66e-01 96.7% 86.9%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 20.0 3.02e-01 94.7% 73.8%
3hkxA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.55 49.0 4.15e-01 98.7% 94.3%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 28.0 3.18e-01 97.4% 63.2%
4rctA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.54 43.0 4.01e-01 99.3% 68.1%
1ekeA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 38.0 3.66e-01 71.5% 94.7%
4h5uA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.54 47.0 3.81e-01 96.7% 96.0%
3s28A03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 46.0 3.68e-01 94.0% 89.1%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 26.0 2.73e-01 97.4% 51.1%
4rpcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 36.0 3.10e-01 74.8% 65.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3265915 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 60.0 4.62e-01 95.4% 95.2%
3175032 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 61.0 4.75e-01 97.4% 99.7%
5048196 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.66 56.0 4.82e-01 90.7% 97.9%
4527453 246.2.1.7 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › DNA_pol_E_B 0.65 55.0 4.23e-01 91.4% 75.2%
4974960 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.65 56.0 4.70e-01 91.4% 98.8%
3984944 213.2.1.0 ↗ a+b three layers › Nat/Ivy › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme, Ivy 0.62 23.0 3.07e-01 96.7% 60.0%
3510656 2485.1.1.71 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SelP_N 0.58 46.0 4.60e-01 92.7% 78.8%
4978967 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.58 52.0 4.22e-01 97.4% 95.7%
3315370 2003.1.1.135 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Castor_Poll_mid 0.56 40.0 3.75e-01 72.8% 80.0%
3322623 129.1.1.95 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Castor_Poll_mid 0.56 40.0 3.76e-01 73.5% 80.5%
3819436 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.55 38.0 3.59e-01 70.9% 82.2%
1487346 300.1.1.5 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › RE_NgoFVII 0.54 43.0 4.08e-01 99.3% 70.4%
5027983 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.53 46.0 4.01e-01 96.0% 96.2%
4021476 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.52 44.0 3.92e-01 91.4% 79.1%
3464663 2003.1.1.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.51 35.0 3.52e-01 70.9% 94.4%
4992336 7516.1.1.10 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.51 45.0 3.98e-01 96.0% 75.8%
4385474 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.50 43.0 3.88e-01 92.7% 100.0%
3797861 7516.1.1.37 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.50 45.0 3.60e-01 99.3% 81.9%
D6 medium residues 517-704
PDB
Domain cluster: rep: NC_055866.1__YP_010110035.1__KNV24_gp23__00023__D170-188_310-448