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ON381768.1__URG18068.1__X__00001

Bact-Vir

ON381768.1__URG18068.1__X__00001

Identity

Accession:
ON381768 ↗
Kingdom:
phage

Quality

86.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Jerseyvirus› Salmonella_phage_vB_SenS_SP8

TaxID: 2945955

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-61
PDB
Domain cluster: rep: MG592659.1__AUS01756.1__NVP1291O_42__00042__D16-64
D2 medium residues 62-169
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF18668.7 best Tail_spike_N 49.1 6.70e-13 63.9% 78.6%
PF09251.17 PhageP22-tail 26.6 2.70e-06 30.6% 5.8%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 36.0 4.13e-01 73.1% 90.8%
2yzcA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.56 39.0 2.95e-01 73.1% 74.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2442382 3856.1.1.1 ↗ beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › Tail_spike_N 0.66 57.0 4.56e-01 95.4% 49.7%
3489096 4207.1.1.0 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.50 29.0 3.23e-01 76.9% 70.0%