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ON416862.2__URQ03915.1__ASU11_gp5c__00005

Bact-Vir

ON416862.2__URQ03915.1__ASU11_gp5c__00005

Identity

Accession:
ON416862 ↗
Kingdom:
phage

Quality

72.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-107
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06820.17 best Phage_fiber_C 124.3 2.80e-36 98.4% 100.0%
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cz3B00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.68 47.0 3.38e-01 71.4% 32.1%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.66 45.0 3.92e-01 71.4% 56.7%
3drxB03 3.30.70.2000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 49.0 5.40e-01 81.0% 100.0%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 36.0 2.35e-01 96.8% 11.9%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.60 45.0 3.96e-01 81.0% 72.6%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.60 42.0 3.04e-01 87.3% 24.4%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 4.11e-01 95.2% 65.4%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.57 38.0 3.19e-01 96.8% 37.1%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.04e-01 93.7% 57.7%
1g87A02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.57 45.0 3.42e-01 88.9% 69.8%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 44.0 3.80e-01 87.3% 65.4%
1d5yB03 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.56 46.0 3.49e-01 96.8% 79.2%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.87e-01 90.5% 60.4%
3so5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.80e-01 92.1% 65.7%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 42.0 3.51e-01 87.3% 54.1%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.81e-01 95.2% 64.3%
2iteA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.56e-01 93.7% 46.3%
3tm4A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.55 41.0 3.01e-01 82.5% 34.9%
3qdkA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 44.0 2.94e-01 90.5% 86.0%
1v05A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.81e-01 92.1% 58.3%
1ja1A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 41.0 3.47e-01 87.3% 56.6%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.81e-01 95.2% 66.0%
5wl1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.82e-01 93.7% 61.4%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.79e-01 88.9% 72.3%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.54 43.0 3.90e-01 90.5% 64.0%
3f8uD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.82e-01 96.8% 67.9%
1a6aB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.68e-01 90.5% 63.3%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 3.89e-01 98.4% 71.1%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.77e-01 87.3% 72.9%
3djlA03 2.40.110.20 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › 0.53 42.0 3.20e-01 88.9% 43.6%
5h5zA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.75e-01 88.9% 69.3%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.52 41.0 3.45e-01 88.9% 54.8%
4q97A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.60e-01 93.7% 61.1%
1x7vA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.73e-01 93.7% 69.4%
4o5lL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.59e-01 90.5% 61.5%
4q9cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.64e-01 93.7% 62.9%
1cqkA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.64e-01 93.7% 64.4%
5kckA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.52 41.0 2.52e-01 90.5% 19.8%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 3.63e-01 93.7% 67.0%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.64e-01 93.7% 64.3%
3d85D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.41e-01 90.5% 68.9%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.35e-01 93.7% 58.2%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 33.0 3.15e-01 96.8% 54.4%
1k8iB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 3.61e-01 95.2% 65.7%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1141903 3488.1.1.0 ↗ a+b three layers › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain › Putative sensor histidine kinase domain 0.66 45.0 3.92e-01 71.4% 56.7%
3483231 304.166.1.0 ↗ a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain 0.66 50.0 3.87e-01 82.5% 49.0%
3664467 11.1.1.122 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set 0.61 50.0 3.99e-01 90.5% 62.3%
3222920 10.32.1.213 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.61 48.0 3.85e-01 88.9% 88.7%
3744319 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 45.0 3.68e-01 87.3% 50.4%
4985494 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 39.0 2.29e-01 100.0% 8.8%
330634 304.16.1.1 ↗ a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.59 50.0 4.48e-01 95.2% 71.4%
3842698 2007.9.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.56 45.0 2.96e-01 92.1% 23.0%
4272494 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 43.0 3.59e-01 92.1% 54.4%
3896289 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 44.0 3.85e-01 93.7% 61.9%
5056674 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.87e-01 93.7% 68.6%
5035459 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 44.0 4.05e-01 90.5% 74.1%
3241973 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 3.84e-01 90.5% 82.0%
3306325 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.55 42.0 3.81e-01 90.5% 61.1%
3854360 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.54 43.0 3.65e-01 92.1% 59.1%
3902779 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 43.0 3.79e-01 90.5% 64.0%
3892414 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.54 43.0 3.83e-01 93.7% 60.0%
3063864 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.54 42.0 3.73e-01 90.5% 63.4%
3557988 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 43.0 3.48e-01 93.7% 48.6%
4283605 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 3.56e-01 87.3% 57.1%
3892050 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 41.0 3.45e-01 88.9% 51.7%
3745942 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.53 41.0 3.57e-01 93.7% 59.1%
3931662 206.1.1.44 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF1679 0.53 44.0 2.87e-01 100.0% 66.0%
3934459 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 42.0 3.71e-01 93.7% 66.0%
4943219 205.1.1.123 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD 0.53 41.0 3.12e-01 85.7% 39.4%
3394335 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 41.0 3.18e-01 93.7% 37.6%
4003859 11.1.5.94 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.52 39.0 2.93e-01 88.9% 53.7%
5063180 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.52 40.0 3.77e-01 87.3% 73.8%
5042725 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.52 41.0 3.75e-01 92.1% 71.1%
3866684 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 41.0 2.57e-01 93.7% 15.5%
3250648 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.51 41.0 3.52e-01 87.3% 65.0%
5006437 70.2.1.6 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DUF22 0.51 41.0 3.50e-01 96.8% 61.3%
3246527 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 40.0 2.71e-01 96.8% 41.5%
3933059 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.51 40.0 3.40e-01 92.1% 55.7%
5050287 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.51 41.0 3.79e-01 98.4% 81.1%
3521407 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.50 37.0 2.33e-01 81.0% 24.9%
3409988 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.50 40.0 3.47e-01 95.2% 60.0%
3558877 304.49.1.2 ↗ a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 › a_DG1_N2 0.50 41.0 3.17e-01 92.1% 67.6%