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ON453895.1__WAK79035.1__X__00020

Bact-Vir

ON453895.1__WAK79035.1__X__00020

Identity

Accession:
ON453895 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Akkermansia_phage_Chantilly

TaxID: 2951967

Cluster

View cluster (78 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-266_303-336_348-397
PDB
Domain cluster: rep: IMGVR_UViG_3300035312_000244-3300035312-Ga0393750_008065_4082_5470__D34-230_308-363
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF06074.19 best Portal_Mu 64.4 1.60e-17 60.6% 50.6%
PF06074.19 Portal_Mu 39.6 5.70e-10 26.8% 24.7%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kdrA02 3.40.140.120 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › 0.72 29.0 4.56e-01 77.6% 92.1%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 22.0 3.65e-01 73.5% 83.6%
5zw7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.63 22.0 3.10e-01 70.7% 61.8%
8cdaB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 24.0 3.37e-01 74.4% 71.1%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.56 22.0 3.00e-01 71.9% 66.2%
6t0bc02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.55 21.0 2.66e-01 73.5% 54.5%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.52 29.0 3.80e-01 97.5% 93.4%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.51 30.0 3.80e-01 81.4% 94.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4676609 4038.1.1.10 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Portal_Mu 0.74 61.0 6.29e-01 94.6% 87.9%
3886244 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.64 31.0 3.88e-01 83.9% 71.5%
3831865 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.63 20.0 3.14e-01 74.4% 66.9%
3518485 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.61 30.0 3.73e-01 83.9% 73.3%
3500900 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.61 21.0 3.18e-01 76.7% 68.9%
3911662 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.60 29.0 3.58e-01 84.2% 68.8%
3848155 633.23.1.1 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin 0.60 32.0 3.83e-01 83.9% 74.3%
3303028 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.60 20.0 2.88e-01 73.2% 59.4%
3731029 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.56 21.0 3.11e-01 83.3% 74.1%
3421505 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.50 20.0 2.74e-01 76.3% 66.5%