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ON453897.1__WAK79161.1__X__00056
Bact-VirON453897.1__WAK79161.1__X__00056
Identity
- Accession:
- ON453897 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.67 | 53.0 | 5.05e-01 | 100.0% | 72.3% |
| 3zx4A02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.66 | 45.0 | 3.89e-01 | 70.9% | 100.0% |
| 1wzcA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.65 | 44.0 | 3.90e-01 | 70.9% | 100.0% |
| 4g08A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.62 | 44.0 | 4.21e-01 | 80.0% | 95.7% |
| 2incA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.60 | 48.0 | 2.81e-01 | 100.0% | 10.0% |
| 4jcjB01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.59 | 52.0 | 4.87e-01 | 100.0% | 80.0% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.59 | 43.0 | 3.99e-01 | 83.6% | 87.0% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.58 | 53.0 | 4.62e-01 | 100.0% | 67.9% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.57 | 50.0 | 4.18e-01 | 100.0% | 59.8% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.57 | 47.0 | 2.74e-01 | 100.0% | 10.1% |
| 3h6eB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 38.0 | 3.24e-01 | 72.7% | 80.8% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.55 | 41.0 | 3.53e-01 | 83.6% | 78.9% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.64e-01 | 85.5% | 65.6% |
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.55 | 41.0 | 3.73e-01 | 89.1% | 81.2% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.51e-01 | 81.8% | 72.6% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.74e-01 | 83.6% | 76.8% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.61e-01 | 78.2% | 88.4% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.54e-01 | 87.3% | 70.7% |
| 3e59B02 | 3.30.60.140 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.52 | 33.0 | 3.54e-01 | 74.5% | 92.1% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.19e-01 | 83.6% | 62.4% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3207695 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 51.0 | 5.38e-01 | 92.7% | 74.0% |
| 3688034 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 55.0 | 4.50e-01 | 100.0% | 41.0% |
| 3541608 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.73 | 51.0 | 5.51e-01 | 100.0% | 88.9% |
| 4959094 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 49.0 | 4.98e-01 | 96.4% | 70.9% |
| 3549240 | 5.1.4.253 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_Gbeta | 0.71 | 47.0 | 2.83e-01 | 96.4% | 9.6% |
| 4977157 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 51.0 | 5.44e-01 | 100.0% | 93.3% |
| 3559714 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.70 | 52.0 | 5.63e-01 | 98.2% | 95.6% |
| 5013172 | 375.1.5.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein Ta0289-C | 0.70 | 41.0 | 4.93e-01 | 89.1% | 94.3% |
| 3919489 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 45.0 | 5.08e-01 | 98.2% | 97.5% |
| 3642367 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 47.0 | 5.10e-01 | 89.1% | 100.0% |
| 3271219 | 389.1.1.2 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Laminin_EGF | 0.60 | 35.0 | 3.77e-01 | 81.8% | 68.9% |
| 3918443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 44.0 | 4.79e-01 | 100.0% | 97.8% |
| 3907976 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.59 | 43.0 | 4.66e-01 | 100.0% | 97.8% |
| 3514524 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.59 | 44.0 | 3.21e-01 | 80.0% | 39.3% |
| 3665314 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.58 | 40.0 | 4.48e-01 | 96.4% | 100.0% |
| 3289936 | 6045.1.1.1 ↗ | a+b complex topology › C-terminal domain of BipA › C-terminal domain of BipA › C-terminal domain of BipA › BipA_C | 0.57 | 42.0 | 3.38e-01 | 85.5% | 65.4% |
| 3825851 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 48.0 | 4.48e-01 | 98.2% | 77.1% |
| None | — | 0.56 | 45.0 | 4.05e-01 | 96.4% | 84.7% | |
| 4597621 | 150.1.2.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Phenol_Hydrox | 0.56 | 47.0 | 2.72e-01 | 100.0% | 10.0% |
| 3163818 | 6045.1.1.1 ↗ | a+b complex topology › C-terminal domain of BipA › C-terminal domain of BipA › C-terminal domain of BipA › BipA_C | 0.55 | 43.0 | 3.46e-01 | 90.9% | 73.6% |
| 4002788 | 376.1.1.42 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zinc_ribbon_16 | 0.55 | 47.0 | 4.03e-01 | 100.0% | 58.9% |
| 1389175 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.55 | 39.0 | 3.60e-01 | 80.0% | 80.5% |
| 5014569 | 2004.1.1.97 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB | 0.55 | 38.0 | 2.56e-01 | 72.7% | 45.0% |
| 4174817 | 327.16.1.17 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27474 | 0.54 | 35.0 | 3.68e-01 | 72.7% | 73.5% |
| 3271019 | 101.1.2.113 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 | 0.54 | 41.0 | 3.19e-01 | 83.6% | 48.8% |
| 4980135 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 3.20e-01 | 80.0% | 60.2% |
| 5009738 | 1144.1.1.1 ↗ | beta sandwiches › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Apc (acetophenone carboxylase) beta subunit C-terminal domain › Hydantoinase_B | 0.53 | 42.0 | 2.92e-01 | 92.7% | 67.8% |
| 4954867 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.69e-01 | 83.6% | 76.0% |
| 3264367 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 3.38e-01 | 85.5% | 65.0% |
| 4955611 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 40.0 | 3.32e-01 | 83.6% | 65.4% |
| 4636335 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.53 | 41.0 | 3.88e-01 | 83.6% | 73.8% |
| 3642332 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.26e-01 | 89.1% | 51.7% |
| 3797433 | 60.1.2.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain | 0.52 | 37.0 | 2.47e-01 | 83.6% | 56.1% |
| 4973217 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.41e-01 | 83.6% | 71.8% |
| 2511579 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.51 | 38.0 | 3.34e-01 | 85.5% | 64.4% |
| 4609849 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 38.0 | 3.28e-01 | 83.6% | 72.2% |
| 4983405 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.50 | 38.0 | 2.81e-01 | 83.6% | 43.6% |