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ON453898.1__WAK79227.1__X__00027
Bact-VirON453898.1__WAK79227.1__X__00027
Identity
- Accession:
- ON453898 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-104
Domain cluster:
rep: IMGVR_UViG_3300006204_000297-3300006204-Ga0081182_10005293__D23-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14297.13 best | Lin1244_N | 52.9 | 6.80e-14 | 89.1% | 92.7% |
D2
high
residues 177-229
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 64.0 | 5.98e-01 | 100.0% | 77.9% |
| 3jsjC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 48.0 | 3.32e-01 | 73.6% | 22.4% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.68 | 58.0 | 4.86e-01 | 100.0% | 60.4% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 49.0 | 4.45e-01 | 100.0% | 56.6% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.66 | 53.0 | 5.22e-01 | 98.1% | 84.5% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 50.0 | 4.50e-01 | 86.8% | 60.3% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 46.0 | 3.42e-01 | 77.4% | 63.3% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 51.0 | 4.62e-01 | 100.0% | 68.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 42.0 | 3.93e-01 | 71.7% | 69.2% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.61 | 44.0 | 4.54e-01 | 96.2% | 87.5% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.61 | 42.0 | 4.36e-01 | 83.0% | 81.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 43.0 | 3.27e-01 | 75.5% | 78.3% |
| 2gomA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.59 | 40.0 | 3.81e-01 | 77.4% | 60.7% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.59 | 42.0 | 4.37e-01 | 96.2% | 87.5% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 52.0 | 4.48e-01 | 100.0% | 71.4% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.59 | 47.0 | 3.78e-01 | 88.7% | 63.6% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.59 | 48.0 | 4.41e-01 | 100.0% | 80.3% |
| 2pdoA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 48.0 | 3.71e-01 | 98.1% | 41.1% |
| 3nrkA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.56 | 44.0 | 3.00e-01 | 86.8% | 69.3% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.56 | 45.0 | 3.40e-01 | 96.2% | 66.2% |
| 1vmiA01 | 3.40.50.10950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 46.0 | 3.30e-01 | 96.2% | 78.5% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 39.0 | 3.06e-01 | 81.1% | 35.3% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 45.0 | 4.31e-01 | 100.0% | 78.1% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 39.0 | 3.14e-01 | 75.5% | 47.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 39.0 | 3.35e-01 | 75.5% | 93.7% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 37.0 | 3.53e-01 | 75.5% | 69.7% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.53 | 37.0 | 3.45e-01 | 73.6% | 69.1% |
| 2oyyA00 | 6.10.80.10 | Special › Helix non-globular › DNA polymerase; domain 1 › Hexameric tyrosine-coordinated heme protein (HTHP) | 0.53 | 39.0 | 3.67e-01 | 84.9% | 64.8% |
| 3rkoF01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.53 | 41.0 | 2.96e-01 | 84.9% | 41.2% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.53 | 43.0 | 3.63e-01 | 100.0% | 75.2% |
| 3kzxA02 | 1.10.150.730 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 35.0 | 3.43e-01 | 71.7% | 100.0% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.52 | 38.0 | 3.32e-01 | 100.0% | 48.9% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.58e-01 | 88.7% | 67.1% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.51 | 40.0 | 2.81e-01 | 92.5% | 70.0% |
| 3zhiA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 38.0 | 3.55e-01 | 88.7% | 89.0% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.51 | 43.0 | 4.26e-01 | 100.0% | 89.7% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 40.0 | 2.68e-01 | 88.7% | 100.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3219940 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.76 | 65.0 | 6.47e-01 | 100.0% | 96.4% |
| 2817443 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.75 | 64.0 | 3.72e-01 | 100.0% | 14.6% |
| 3738331 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 58.0 | 5.76e-01 | 100.0% | 90.9% |
| 3486206 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 60.0 | 5.43e-01 | 100.0% | 69.3% |
| 4986010 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 59.0 | 3.96e-01 | 100.0% | 24.4% |
| 3224363 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.69 | 64.0 | 5.36e-01 | 100.0% | 88.2% |
| 3782810 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.69 | 49.0 | 5.05e-01 | 100.0% | 84.0% |
| 4169204 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.68 | 45.0 | 4.52e-01 | 77.4% | 65.5% |
| 3580853 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 45.0 | 4.25e-01 | 75.5% | 55.4% |
| 4119015 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 50.0 | 4.82e-01 | 96.2% | 71.7% |
| 3878853 | 4044.1.1.13 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › BicD | 0.66 | 59.0 | 5.03e-01 | 100.0% | 62.4% |
| 3914715 | 605.1.1.235 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › BicD | 0.66 | 59.0 | 5.23e-01 | 100.0% | 70.7% |
| 4937584 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.63 | 45.0 | 4.02e-01 | 75.5% | 54.7% |
| 4341780 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.63 | 47.0 | 4.50e-01 | 100.0% | 67.7% |
| 3254545 | 103.11.1.0 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related | 0.63 | 50.0 | 4.98e-01 | 100.0% | 83.6% |
| 3928496 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.63 | 46.0 | 4.51e-01 | 100.0% | 75.0% |
| 5067754 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.49e-01 | 100.0% | 76.4% |
| 3951854 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.62 | 50.0 | 4.90e-01 | 98.1% | 86.7% |
| 3465065 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 49.0 | 4.45e-01 | 100.0% | 65.3% |
| 3581398 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 53.0 | 3.94e-01 | 100.0% | 68.9% |
| 3646179 | 4030.1.1.20 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › Ovate | 0.59 | 44.0 | 4.35e-01 | 81.1% | 76.4% |
| 5026085 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.58 | 40.0 | 3.32e-01 | 75.5% | 38.0% |
| 2142130 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.58 | 44.0 | 3.22e-01 | 100.0% | 27.9% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.58 | 44.0 | 2.98e-01 | 81.1% | 75.7% |
| 3968859 | 4198.1.1.3 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › DUF533 | 0.57 | 48.0 | 3.48e-01 | 96.2% | 91.0% |
| 3536325 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 37.0 | 3.69e-01 | 77.4% | 63.6% |
| 5060357 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 46.0 | 4.14e-01 | 100.0% | 63.7% |
| 4888664 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 52.0 | 5.22e-01 | 100.0% | 98.1% |
| 3473566 | 622.1.1.19 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › Casc1_N | 0.55 | 40.0 | 3.33e-01 | 77.4% | 63.2% |
| 5004259 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.55 | 47.0 | 4.28e-01 | 100.0% | 98.7% |
| 4423918 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.55 | 46.0 | 3.05e-01 | 100.0% | 74.0% |
| 4954843 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.54 | 48.0 | 3.94e-01 | 100.0% | 83.2% |
| 4944926 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 40.0 | 2.77e-01 | 86.8% | 89.8% |
| 4994837 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.52 | 46.0 | 3.88e-01 | 100.0% | 100.0% |
| 4613072 | 101.1.2.721 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 | 0.51 | 44.0 | 3.14e-01 | 100.0% | 53.9% |
| 5048188 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.08e-01 | 100.0% | 61.9% |