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ON453899.1__WAK79319.1__X__00031
Bact-VirON453899.1__WAK79319.1__X__00031
Identity
- Accession:
- ON453899 ↗
- Kingdom:
- phage
Quality
64.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-65_145-187
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.66 | 46.0 | 3.77e-01 | 82.4% | 39.1% |
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.64 | 45.0 | 3.76e-01 | 74.1% | 56.7% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.62 | 46.0 | 4.48e-01 | 79.6% | 71.2% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 44.0 | 3.12e-01 | 73.1% | 27.7% |
| 6nyyE01 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.59 | 49.0 | 4.15e-01 | 88.0% | 90.2% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 41.0 | 4.09e-01 | 71.3% | 67.9% |
| 2ce7B03 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.58 | 48.0 | 4.09e-01 | 88.0% | 83.3% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.58 | 35.0 | 4.29e-01 | 76.9% | 100.0% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 43.0 | 3.47e-01 | 81.5% | 65.0% |
| 3sqgB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 36.0 | 3.26e-01 | 72.2% | 48.3% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 29.0 | 2.72e-01 | 78.7% | 40.3% |
| 2dgkA02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.55 | 36.0 | 3.63e-01 | 72.2% | 65.4% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 3.68e-01 | 70.4% | 67.9% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.54 | 36.0 | 3.41e-01 | 72.2% | 56.0% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 41.0 | 4.06e-01 | 80.6% | 80.0% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 43.0 | 2.99e-01 | 86.1% | 72.5% |
| 2fltA00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.53 | 38.0 | 3.76e-01 | 75.9% | 74.4% |
| 2g47A04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 39.0 | 3.13e-01 | 82.4% | 54.2% |
| 1eiaA01 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.51 | 39.0 | 3.64e-01 | 85.2% | 64.7% |
| 5n1qB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.14e-01 | 72.2% | 50.3% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.51 | 28.0 | 3.24e-01 | 75.9% | 73.7% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 36.0 | 3.10e-01 | 72.2% | 50.0% |
| 4gqoA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 36.0 | 2.99e-01 | 75.9% | 87.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929747 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.63 | 44.0 | 3.52e-01 | 82.4% | 36.3% |
| 5038341 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.62 | 44.0 | 4.53e-01 | 75.0% | 76.2% |
| 4979602 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.61 | 47.0 | 3.78e-01 | 83.3% | 42.2% |
| 4972532 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.60 | 45.0 | 4.91e-01 | 77.8% | 100.0% |
| None | — | 0.60 | 44.0 | 2.85e-01 | 80.6% | 17.5% | |
| 4183868 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.58 | 41.0 | 4.74e-01 | 72.2% | 100.0% |
| 3945841 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.58 | 41.0 | 4.18e-01 | 73.1% | 76.2% |
| None | — | 0.57 | 40.0 | 3.63e-01 | 73.1% | 51.6% | |
| 5045252 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.57 | 43.0 | 4.52e-01 | 78.7% | 90.0% |
| 3615029 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.56 | 37.0 | 3.99e-01 | 75.0% | 82.2% |
| 3227000 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.55 | 45.0 | 2.73e-01 | 89.8% | 34.0% |
| 3700805 | 304.9.1.107 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › FAZ1_cons | 0.54 | 38.0 | 4.11e-01 | 76.9% | 86.7% |
| 3700806 | 304.31.1.3 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › FAZ1_cons | 0.54 | 37.0 | 3.98e-01 | 76.9% | 81.1% |
| 3705403 | 304.47.1.2 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › FAZ1_cons | 0.54 | 38.0 | 4.03e-01 | 78.7% | 83.2% |
| 2337282 | 6170.1.1.1 ↗ | alpha bundles › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › Kv7 proximal C-terminal Domain › KCNQ_channel | 0.54 | 39.0 | 4.18e-01 | 88.0% | 91.0% |
| 3705407 | 304.47.1.2 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › FAZ1_cons | 0.53 | 37.0 | 3.93e-01 | 76.9% | 81.1% |
| 3748911 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 39.0 | 2.78e-01 | 93.5% | 23.3% |
| 5050894 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.53 | 46.0 | 3.63e-01 | 98.1% | 84.2% |
| 3591694 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.53 | 36.0 | 3.89e-01 | 72.2% | 83.3% |
| 5025448 | 1075.1.1.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 | 0.52 | 41.0 | 3.03e-01 | 87.0% | 32.1% |
| 3615120 | 375.1.1.207 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FAZ1_cons | 0.52 | 36.0 | 3.92e-01 | 75.9% | 86.7% |
| 3713464 | 375.1.1.207 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FAZ1_cons | 0.52 | 35.0 | 3.81e-01 | 73.1% | 84.4% |
| 4030041 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.51 | 37.0 | 3.45e-01 | 80.6% | 62.3% |
D2
medium
residues 66-144