Back to structures

ON453899.1__WAK79332.1__X__00044

Bact-Vir

ON453899.1__WAK79332.1__X__00044

Identity

Accession:
ON453899 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

TaxID: 2951971

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-136
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.56 34.0 3.66e-01 77.8% 70.8%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.55 36.0 4.12e-01 79.3% 87.4%
4px7A00 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.55 42.0 3.48e-01 82.2% 91.2%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 32.0 3.55e-01 95.6% 72.9%
3ddlA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 43.0 3.51e-01 86.7% 82.9%
2pfdA03 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.53 34.0 2.98e-01 73.3% 42.4%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.53 39.0 3.80e-01 86.7% 68.4%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 44.0 4.38e-01 91.9% 96.6%
1fntc01 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.52 44.0 4.00e-01 92.6% 87.2%
4j8sA00 1.25.40.840 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain 0.51 39.0 3.57e-01 80.7% 91.1%
3le2A01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.51 37.0 3.19e-01 77.8% 74.6%
1zylA03 1.20.1270.170 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 30.0 3.33e-01 71.1% 73.8%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.51 32.0 3.11e-01 76.3% 56.1%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.50 35.0 3.14e-01 72.6% 74.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4942061 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.65 28.0 3.58e-01 95.6% 65.9%
4015733 132.1.1.0 alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.58 33.0 3.71e-01 97.8% 70.9%
5041397 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.56 33.0 4.05e-01 75.6% 91.8%
4969260 5067.1.1.0 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.55 44.0 2.85e-01 85.2% 69.0%
3590215 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.54 39.0 3.00e-01 98.5% 32.7%
3275929 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 36.0 3.69e-01 96.3% 70.8%
3187931 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.53 47.0 3.29e-01 100.0% 71.2%
3729299 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.53 45.0 4.34e-01 92.6% 92.3%
1148047 601.7.1.2 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.52 45.0 4.33e-01 91.9% 94.0%
3221528 5001.1.1.41 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.52 43.0 3.52e-01 90.4% 80.4%
3785916 3559.1.1.40 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 0.52 32.0 3.58e-01 99.3% 75.5%
5073391 604.39.1.6 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › QueT 0.52 41.0 3.83e-01 87.4% 65.7%
3720394 5050.1.1.56 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, TRI12 0.51 47.0 3.10e-01 100.0% 52.1%
3410958 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 42.0 3.26e-01 90.4% 81.9%
3409557 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.51 42.0 3.48e-01 91.9% 85.0%
3419666 601.19.1.26 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › DUF632 0.50 43.0 3.96e-01 91.9% 98.3%
3482151 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.50 45.0 3.60e-01 100.0% 71.6%