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ON453899.1__WAK79396.1__X__00108

Bact-Vir

ON453899.1__WAK79396.1__X__00108

Identity

Accession:
ON453899 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Taxonomy

Clostridium_phage_Amboise

TaxID: 2951971

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-93
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 39.0 4.69e-01 70.9% 79.3%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 34.0 3.75e-01 75.6% 57.5%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 34.0 3.50e-01 75.6% 51.8%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 47.0 4.30e-01 76.7% 73.7%
2ivxB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 46.0 4.19e-01 75.6% 67.0%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 45.0 3.98e-01 76.7% 70.5%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.63 44.0 4.41e-01 73.3% 74.7%
1xaxA00 3.40.390.30 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" 0.63 45.0 3.86e-01 76.7% 88.9%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 45.0 4.11e-01 77.9% 75.0%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 41.0 4.23e-01 73.3% 92.3%
1g2nA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.57 43.0 3.16e-01 80.2% 74.4%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.57 39.0 3.98e-01 73.3% 92.0%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 35.0 3.58e-01 74.4% 63.2%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.52 40.0 3.73e-01 89.5% 65.2%
7neaA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.51 37.0 3.36e-01 76.7% 59.5%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.51 37.0 3.43e-01 77.9% 82.5%
3cm0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.32e-01 93.0% 69.6%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253480 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.72 50.0 3.81e-01 70.9% 74.1%
5078899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 49.0 4.53e-01 76.7% 90.0%
3724015 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.66 48.0 4.11e-01 76.7% 57.9%
3703267 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 47.0 4.24e-01 76.7% 75.0%
5073390 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.65 47.0 4.22e-01 77.9% 80.0%
4943136 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.65 46.0 4.63e-01 76.7% 84.4%
3432597 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 47.0 4.37e-01 75.6% 81.9%
4975400 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 47.0 4.32e-01 77.9% 83.5%
3277203 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 46.0 3.86e-01 76.7% 52.9%
4943990 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 46.0 4.09e-01 76.7% 78.1%
3598971 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.63 45.0 3.92e-01 76.7% 59.3%
4990528 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 44.0 4.52e-01 76.7% 89.4%
5048634 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 45.0 4.13e-01 77.9% 88.7%
5001330 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.60 43.0 3.97e-01 76.7% 75.7%
5065637 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.59 33.0 3.26e-01 77.9% 50.5%
4948165 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.59 42.0 3.94e-01 76.7% 90.9%
10305 7516.1.1.25 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TcdA_TcdB 0.56 42.0 2.66e-01 79.1% 27.6%
4945701 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 4.32e-01 81.4% 91.8%
3376834 109.4.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › W2 0.55 41.0 3.30e-01 81.4% 70.7%
3249600 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.55 44.0 3.58e-01 88.4% 78.8%
3989015 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.02e-01 84.9% 80.0%
3842613 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.50 40.0 4.18e-01 91.9% 95.0%