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ON453900.1__WAK79448.1__X__00024

Bact-Vir

ON453900.1__WAK79448.1__X__00024

Identity

Accession:
ON453900 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

Taxonomy

Clostridium_phage_Maintenon

TaxID: 2951972

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-101
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.58 50.0 4.57e-01 97.8% 85.6%
4nnaA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 35.0 2.41e-01 84.8% 17.3%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 41.0 3.16e-01 79.3% 60.8%
1x67A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.54 42.0 3.70e-01 82.6% 89.5%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 37.0 3.30e-01 72.8% 87.3%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.54 38.0 3.23e-01 72.8% 92.7%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 38.0 3.22e-01 77.2% 71.7%
3oh8A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 4.07e-01 100.0% 84.3%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 46.0 3.95e-01 100.0% 83.8%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.14e-01 93.5% 71.1%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 37.0 3.23e-01 72.8% 88.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 3.24e-01 98.9% 45.0%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 46.0 3.22e-01 100.0% 36.7%
1bp1A01 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.51 44.0 3.62e-01 98.9% 96.7%
4djhA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 41.0 2.91e-01 89.1% 54.0%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 3.08e-01 100.0% 48.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4618633 4.26.1.1 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Cren7 0.61 29.0 3.50e-01 72.8% 67.8%
3223140 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 46.0 4.25e-01 89.1% 62.5%
5001282 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 41.0 3.51e-01 84.8% 45.5%
5079413 5.1.3.272 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.58 43.0 3.14e-01 78.3% 59.6%
5003966 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.58 36.0 4.19e-01 80.4% 87.7%
5024450 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.57 51.0 4.49e-01 98.9% 83.7%
3747656 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 41.0 3.53e-01 76.1% 79.3%
5021435 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.55 38.0 3.58e-01 83.7% 57.4%
3487112 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 50.0 3.18e-01 100.0% 36.1%
3478132 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.55 50.0 3.22e-01 100.0% 40.5%
3499988 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.55 50.0 2.88e-01 100.0% 20.5%
3702616 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 49.0 4.44e-01 100.0% 93.6%
4213219 109.21.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.55 47.0 2.77e-01 95.7% 34.7%
4013150 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.20e-01 97.8% 46.3%
169663 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.54 37.0 3.16e-01 70.7% 79.0%
3939547 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 49.0 3.32e-01 100.0% 52.1%
3713696 5.1.4.297 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.54 48.0 3.16e-01 97.8% 36.0%
4030680 5.1.4.258 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.53 46.0 3.12e-01 100.0% 91.0%
3632850 5.1.4.119 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.53 47.0 3.12e-01 98.9% 40.8%
4057631 5.1.4.172 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.53 47.0 3.13e-01 98.9% 42.4%
3595257 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 46.0 3.21e-01 98.9% 58.1%
3804236 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 4.01e-01 96.7% 72.1%
3691522 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 47.0 3.14e-01 98.9% 46.6%
3205589 5.1.11.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Rrn6_beta-prop 0.52 47.0 3.05e-01 100.0% 31.2%
3478263 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 46.0 2.90e-01 100.0% 44.3%
3342304 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 3.84e-01 96.7% 65.2%
4927548 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.51 44.0 4.08e-01 95.7% 85.0%
3498392 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 4.03e-01 95.7% 91.6%
3703043 5.1.4.597 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_3 0.51 43.0 3.05e-01 93.5% 64.4%
4888996 5.1.5.77 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR75_1st 0.51 39.0 2.68e-01 81.5% 57.5%
3666904 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 40.0 2.84e-01 88.0% 82.8%
3407369 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 45.0 3.00e-01 97.8% 41.3%
3177659 5.1.4.307 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.51 46.0 2.95e-01 100.0% 45.4%
4024042 223.2.1.31 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_2 0.51 43.0 3.53e-01 97.8% 92.4%
3445812 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 3.85e-01 95.7% 72.1%
3487292 5.1.4.34 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.51 45.0 2.80e-01 100.0% 30.8%
4445317 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.50 37.0 3.15e-01 77.2% 76.1%
3917795 5.1.4.173 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.50 45.0 3.03e-01 100.0% 42.0%
3559756 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 44.0 3.04e-01 97.8% 58.2%
3168805 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 45.0 3.08e-01 100.0% 47.6%
3631256 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.50 45.0 3.01e-01 100.0% 36.3%
3591253 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 44.0 2.97e-01 98.9% 46.3%