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ON453900.1__WAK79475.1__X__00051
Bact-VirON453900.1__WAK79475.1__X__00051
Identity
- Accession:
- ON453900 ↗
- Kingdom:
- phage
Quality
95.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-85
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mctA00 | 2.60.40.4250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 41.0 | 3.60e-01 | 95.8% | 42.2% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.65 | 47.0 | 4.12e-01 | 77.5% | 72.0% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 56.0 | 4.42e-01 | 100.0% | 63.7% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 4.03e-01 | 78.9% | 82.9% |
| 5teqA01 | 3.30.470.110 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.62 | 54.0 | 3.84e-01 | 100.0% | 80.2% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.62 | 47.0 | 4.19e-01 | 83.1% | 86.3% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 49.0 | 3.95e-01 | 91.5% | 78.9% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.61 | 44.0 | 3.50e-01 | 77.5% | 55.7% |
| 4i0nA00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.59 | 48.0 | 3.28e-01 | 90.1% | 45.5% |
| 7oufB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 45.0 | 3.62e-01 | 84.5% | 43.6% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.58 | 50.0 | 4.73e-01 | 97.2% | 94.3% |
| 3wa7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 42.0 | 2.63e-01 | 80.3% | 95.5% |
| 2gumB03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.57 | 49.0 | 4.18e-01 | 97.2% | 87.6% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 37.0 | 3.71e-01 | 74.6% | 64.0% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.57 | 46.0 | 3.71e-01 | 90.1% | 76.2% |
| 2jbwA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 50.0 | 3.38e-01 | 100.0% | 35.9% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 44.0 | 2.83e-01 | 98.6% | 19.5% |
| 3fy6A01 | 3.30.2210.10 | Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily | 0.55 | 49.0 | 4.28e-01 | 100.0% | 86.9% |
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.55 | 33.0 | 3.50e-01 | 81.7% | 65.6% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 4.16e-01 | 81.7% | 87.1% |
| 3lxuX02 | 2.20.25.690 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 38.0 | 3.83e-01 | 73.2% | 95.8% |
| 4hxfB02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 49.0 | 3.27e-01 | 100.0% | 38.2% |
| 3kdaA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 42.0 | 2.80e-01 | 83.1% | 39.1% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 4.37e-01 | 100.0% | 82.6% |
| 5yznA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 47.0 | 3.24e-01 | 100.0% | 39.5% |
| 4psuA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 2.91e-01 | 90.1% | 29.7% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 44.0 | 3.73e-01 | 95.8% | 59.5% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 45.0 | 4.02e-01 | 100.0% | 73.4% |
| 3pyfA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 43.0 | 3.49e-01 | 100.0% | 74.2% |
| 4meaA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.76e-01 | 90.1% | 26.9% |
| 4nswA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 45.0 | 3.94e-01 | 100.0% | 88.1% |
| 2i3dB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 3.21e-01 | 100.0% | 43.8% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 45.0 | 3.65e-01 | 100.0% | 56.2% |
| 2c9wA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 42.0 | 3.71e-01 | 95.8% | 61.1% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 45.0 | 4.21e-01 | 100.0% | 80.7% |
| 3qitB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 2.97e-01 | 98.6% | 58.3% |
| 1orvA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.04e-01 | 100.0% | 41.1% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 35.0 | 3.82e-01 | 91.5% | 89.8% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.50 | 43.0 | 3.23e-01 | 98.6% | 80.1% |
| 5e6zC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.69e-01 | 94.4% | 98.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969758 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.72 | 53.0 | 4.89e-01 | 77.5% | 67.8% |
| 395916 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.69 | 60.0 | 4.83e-01 | 100.0% | 76.7% |
| 4309285 | 3844.2.1.2 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › DUF5081 | 0.69 | 48.0 | 3.49e-01 | 97.2% | 27.6% |
| 4965206 | 4221.1.1.3 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PF26008 | 0.66 | 44.0 | 4.45e-01 | 91.5% | 70.0% |
| 5033737 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.66 | 42.0 | 3.14e-01 | 100.0% | 25.0% |
| 4991612 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 4.72e-01 | 77.5% | 98.6% |
| 5047657 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 46.0 | 5.10e-01 | 77.5% | 98.2% |
| 4598583 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.64 | 46.0 | 3.44e-01 | 76.1% | 33.3% |
| 3550970 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.62 | 51.0 | 4.39e-01 | 90.1% | 83.6% |
| 4544568 | 719.1.1.5 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 | 0.62 | 51.0 | 4.38e-01 | 90.1% | 82.7% |
| 3509892 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.61 | 53.0 | 4.06e-01 | 100.0% | 80.0% |
| 3932677 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.61 | 40.0 | 3.15e-01 | 98.6% | 31.5% |
| 3741530 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.61 | 52.0 | 4.33e-01 | 100.0% | 100.0% |
| 4940356 | 219.1.1.97 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase | 0.61 | 50.0 | 3.72e-01 | 100.0% | 34.2% |
| 3244743 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 41.0 | 3.23e-01 | 98.6% | 33.3% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.60 | 51.0 | 3.91e-01 | 100.0% | 79.4% |
| 4297807 | 850.1.1.2 ↗ | a+b three layers › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › Hypothetical protein Ta1206-like › DUF1805 | 0.60 | 45.0 | 4.11e-01 | 83.1% | 92.0% |
| 4028525 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.60 | 50.0 | 3.83e-01 | 100.0% | 77.9% |
| 4940665 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.59 | 44.0 | 4.27e-01 | 100.0% | 70.7% |
| 3306595 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.59 | 50.0 | 3.86e-01 | 100.0% | 78.9% |
| 3491449 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.59 | 50.0 | 3.78e-01 | 100.0% | 80.0% |
| 2096143 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 41.0 | 3.99e-01 | 73.2% | 94.9% |
| 3223396 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 51.0 | 4.42e-01 | 100.0% | 78.3% |
| 3230771 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.58 | 39.0 | 3.70e-01 | 100.0% | 55.6% |
| 3728986 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.58 | 49.0 | 3.82e-01 | 100.0% | 79.4% |
| 3767960 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.57 | 47.0 | 3.91e-01 | 90.1% | 84.0% |
| 3976843 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.57 | 51.0 | 4.75e-01 | 100.0% | 88.8% |
| 3174934 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.57 | 51.0 | 3.31e-01 | 100.0% | 41.6% |
| 3553623 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.57 | 46.0 | 3.87e-01 | 90.1% | 86.4% |
| 3867103 | 3417.1.1.1 ↗ | a+b three layers › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › Surfactant protein C BRICHOS domain › BRICHOS | 0.56 | 41.0 | 3.68e-01 | 80.3% | 64.8% |
| 5033243 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.56 | 47.0 | 4.53e-01 | 91.5% | 95.0% |
| 3609378 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 49.0 | 4.47e-01 | 100.0% | 87.4% |
| 3491895 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.55 | 48.0 | 4.32e-01 | 100.0% | 80.0% |
| 3278049 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.55 | 48.0 | 3.49e-01 | 95.8% | 40.5% |
| 5015727 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.54 | 47.0 | 4.25e-01 | 100.0% | 89.0% |
| 3881671 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.54 | 44.0 | 3.74e-01 | 90.1% | 85.0% |
| 3636368 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.54 | 43.0 | 3.46e-01 | 90.1% | 44.3% |
| 3704121 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 32.0 | 3.47e-01 | 97.2% | 70.7% |
| 3270836 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.54 | 46.0 | 4.02e-01 | 100.0% | 68.7% |
| 3238801 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.53 | 48.0 | 2.93e-01 | 100.0% | 20.9% |
| 5044272 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.53 | 32.0 | 3.56e-01 | 95.8% | 84.0% |
| 3596312 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.53 | 46.0 | 3.83e-01 | 100.0% | 61.5% |
| 3239485 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 47.0 | 3.86e-01 | 100.0% | 70.8% |
| 3240647 | 3794.1.1.3 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT | 0.53 | 46.0 | 3.84e-01 | 97.2% | 61.6% |
| 3952469 | 3794.1.1.2 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCC_alpha_BT | 0.52 | 43.0 | 3.54e-01 | 91.5% | 57.7% |
| 4127133 | 3794.1.1.3 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT | 0.52 | 42.0 | 3.42e-01 | 95.8% | 46.4% |
| 4961380 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.51 | 40.0 | 3.41e-01 | 91.5% | 65.2% |
| 3232437 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 45.0 | 3.91e-01 | 100.0% | 80.0% |
| 3217981 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.51 | 45.0 | 3.41e-01 | 100.0% | 46.5% |
| 3228995 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.51 | 45.0 | 2.65e-01 | 100.0% | 17.0% |
| 3929366 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.50 | 43.0 | 3.87e-01 | 100.0% | 73.3% |