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ON453900.1__WAK79477.1__X__00053
Bact-VirON453900.1__WAK79477.1__X__00053
Identity
- Accession:
- ON453900 ↗
- Kingdom:
- phage
Quality
59.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-71
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.80 | 62.0 | 3.97e-01 | 94.6% | 19.2% |
| 2j5iA02 | 6.10.250.2850 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 58.0 | 5.79e-01 | 91.9% | 81.6% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.74 | 52.0 | 5.26e-01 | 78.4% | 86.1% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.74 | 54.0 | 4.66e-01 | 89.2% | 50.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 60.0 | 5.41e-01 | 100.0% | 82.1% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.71 | 54.0 | 5.01e-01 | 94.6% | 63.6% |
| 2bxhA06 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.70 | 55.0 | 4.76e-01 | 97.3% | 55.2% |
| 1r1dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.70 | 54.0 | 3.33e-01 | 91.9% | 14.5% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 57.0 | 5.64e-01 | 97.3% | 87.8% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.69 | 57.0 | 4.18e-01 | 100.0% | 39.5% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.68 | 50.0 | 4.18e-01 | 94.6% | 43.2% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.67 | 56.0 | 4.82e-01 | 97.3% | 66.1% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 55.0 | 5.12e-01 | 94.6% | 81.2% |
| 5t1dB00 | 3.10.390.20 | Alpha Beta › Roll › SAND domain › Viral glycoprotein L | 0.67 | 48.0 | 3.58e-01 | 78.4% | 42.4% |
| 2reoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 51.0 | 3.19e-01 | 89.2% | 71.5% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 50.0 | 3.51e-01 | 91.9% | 26.9% |
| 2pe4A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 51.0 | 2.90e-01 | 94.6% | 15.6% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 55.0 | 4.46e-01 | 100.0% | 74.0% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.63 | 48.0 | 3.69e-01 | 100.0% | 33.3% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 49.0 | 3.30e-01 | 91.9% | 25.9% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.60 | 43.0 | 4.24e-01 | 78.4% | 82.9% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.57 | 44.0 | 3.24e-01 | 100.0% | 53.9% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.55 | 48.0 | 4.13e-01 | 100.0% | 60.0% |
| 1vwxQ00 | 3.100.10.10 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › | 0.55 | 44.0 | 2.91e-01 | 100.0% | 56.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5068734 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.86 | 77.0 | 5.09e-01 | 100.0% | 82.1% |
| 3278450 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.84 | 71.0 | 5.61e-01 | 100.0% | 51.2% |
| None | — | 0.84 | 70.0 | 4.19e-01 | 100.0% | 15.2% | |
| 3714703 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.84 | 73.0 | 5.29e-01 | 100.0% | 42.0% |
| 4327215 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.82 | 69.0 | 4.90e-01 | 100.0% | 35.7% |
| 5009434 | 11.1.1.157 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3501 | 0.73 | 57.0 | 3.85e-01 | 89.2% | 22.0% |
| 5056476 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.71 | 60.0 | 4.89e-01 | 100.0% | 81.3% |
| 1033128 | 194.1.1.2 ↗ | alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › VitD-bind_III | 0.71 | 54.0 | 4.44e-01 | 91.9% | 44.3% |
| 3924799 | 2484.1.1.107 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 | 0.64 | 53.0 | 3.57e-01 | 100.0% | 46.9% |