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ON453902.1__WAK79654.1__X__00046

Bact-Vir

ON453902.1__WAK79654.1__X__00046

Identity

Accession:
ON453902 ↗
Kingdom:
phage

Quality

97.1 mean pLDDT

Taxonomy

Clostridium_phage_Villandry

TaxID: 2951974

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-70
PDB
Domain cluster: rep: SRR1747065_scaffold_10_prodigal-single.1__X__X__00074__D3-80
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 54.0 5.77e-01 100.0% 93.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 5.86e-01 100.0% 91.8%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 54.0 5.77e-01 100.0% 94.8%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 5.77e-01 100.0% 85.1%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.71 48.0 5.36e-01 100.0% 89.1%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 53.0 5.59e-01 100.0% 88.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 44.0 4.94e-01 100.0% 86.5%
1ug1A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 4.73e-01 100.0% 62.0%
2kxqA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.62 29.0 3.94e-01 94.2% 100.0%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 35.0 3.52e-01 85.5% 53.4%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 40.0 3.31e-01 100.0% 35.9%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.26e-01 95.7% 93.5%
3fi7A02 4.10.80.30 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 0.59 24.0 3.40e-01 94.2% 92.6%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 49.0 4.99e-01 100.0% 98.5%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 46.0 4.49e-01 100.0% 77.3%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.56 43.0 3.85e-01 92.8% 94.7%
8b2gA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 42.0 4.42e-01 85.5% 100.0%
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 41.0 3.96e-01 85.5% 84.6%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 55.0 6.12e-01 100.0% 80.0%
5023740 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 48.0 5.51e-01 100.0% 82.0%
3902975 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 58.0 6.16e-01 95.7% 93.3%
4478971 4.1.1.174 ↗ beta barrels › SH3 › SH3 › SH3 › DUF951 0.76 52.0 5.41e-01 100.0% 75.4%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 56.0 5.95e-01 100.0% 91.7%
3917464 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 58.0 5.96e-01 100.0% 87.7%
3923675 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 55.0 5.71e-01 100.0% 86.2%
3275623 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 55.0 5.11e-01 100.0% 64.7%
3766868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 57.0 5.14e-01 100.0% 63.3%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 55.0 5.36e-01 100.0% 73.3%
3234947 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 55.0 5.63e-01 100.0% 84.6%
3488995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 56.0 5.76e-01 100.0% 87.7%
3486189 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.91e-01 100.0% 95.0%
3769245 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 54.0 5.27e-01 100.0% 73.3%
3240192 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 54.0 5.25e-01 100.0% 73.3%
3507664 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 53.0 5.62e-01 100.0% 91.7%
3464671 4.1.1.136 ↗ beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.70 51.0 5.08e-01 100.0% 75.7%
4138935 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.69 60.0 5.82e-01 100.0% 86.7%
3538030 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 54.0 5.40e-01 100.0% 84.3%
3848483 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.67 60.0 5.33e-01 100.0% 77.6%
3914462 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 53.0 4.88e-01 100.0% 66.7%
3903397 102.1.1.124 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CABIT 0.66 57.0 5.46e-01 98.6% 83.7%
5025933 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 3.84e-01 94.2% 48.4%
3914833 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 47.0 4.75e-01 100.0% 80.0%
3945357 375.1.1.234 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_PaaD 0.59 33.0 4.06e-01 82.6% 95.0%
4021478 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.97e-01 100.0% 65.9%
5023784 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 36.0 3.88e-01 94.2% 81.7%
3622902 375.1.1.89 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like 0.53 33.0 3.81e-01 85.5% 93.3%