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ON453903.1__WAK79686.1__X__00009

Bact-Vir

ON453903.1__WAK79686.1__X__00009

Identity

Accession:
ON453903 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Flavonifractor_phage_Castelnaud

TaxID: 2951975

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-54
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.69 53.0 4.01e-01 82.0% 54.9%
3hzsA00 1.10.3810.10 Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like 0.67 59.0 3.79e-01 94.0% 79.4%
1ydhA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 58.0 3.93e-01 98.0% 31.5%
3l6aA01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.66 57.0 3.86e-01 98.0% 47.9%
7yx8A01 1.10.390.30 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 0.65 48.0 3.38e-01 80.0% 39.3%
3p9aF00 1.10.132.80 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.62 48.0 3.62e-01 88.0% 74.6%
3cnlA02 1.10.1580.10 Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › 0.62 52.0 4.39e-01 100.0% 81.3%
3phuA01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 40.0 2.86e-01 70.0% 45.3%
3k62A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.60 48.0 2.96e-01 100.0% 17.2%
2fgeA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.59 43.0 2.83e-01 80.0% 25.5%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.57 40.0 3.78e-01 78.0% 92.3%
4nnzA01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 45.0 3.02e-01 90.0% 51.5%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 43.0 3.15e-01 100.0% 39.8%
3bemB00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.53 46.0 3.06e-01 100.0% 36.4%
1kgqA01 1.10.166.10 Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.52 41.0 3.87e-01 100.0% 91.4%
1hr7C02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 44.0 2.88e-01 100.0% 54.7%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996648 2006.1.4.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.74 66.0 4.54e-01 98.0% 39.6%
4061821 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.74 59.0 4.98e-01 94.0% 53.8%
4360726 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.73 62.0 3.87e-01 100.0% 17.9%
5029911 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.71 56.0 5.32e-01 86.0% 81.4%
4563321 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.71 57.0 4.77e-01 94.0% 52.4%
5075919 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.71 60.0 5.20e-01 98.0% 78.8%
3613271 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 60.0 4.53e-01 100.0% 86.2%
3992227 11.1.1.153 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ERAP1_C 0.69 59.0 4.39e-01 100.0% 45.2%
3595491 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 56.0 4.18e-01 100.0% 88.6%
3931838 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.28e-01 70.0% 70.9%
3807337 109.4.1.414 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MMS19_N 0.64 54.0 3.59e-01 100.0% 49.8%
1122242 235.1.1.5 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly 0.63 57.0 4.48e-01 100.0% 75.2%
3959807 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.63 58.0 4.51e-01 100.0% 76.0%
4104885 3001.1.1.1 ↗ alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 0.62 49.0 4.02e-01 88.0% 65.3%
3502054 109.4.1.259 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tra1_ring 0.62 53.0 3.44e-01 100.0% 35.1%
2898625 2498.1.1.41 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M60 0.57 49.0 3.06e-01 100.0% 52.4%
5059459 1085.1.1.0 ↗ few secondary structure elements › Archaea X-group 1085 › Archaea H-group 1085.1 › Archaea T-group 1085.1.1 0.57 43.0 3.80e-01 86.0% 88.7%
3574413 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.55 43.0 3.69e-01 92.0% 53.3%
3172621 309.1.1.8 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_M 0.55 45.0 2.96e-01 98.0% 46.3%