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ON453903.1__WAK79713.1__X__00036

Bact-Vir

ON453903.1__WAK79713.1__X__00036

Identity

Accession:
ON453903 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Flavonifractor_phage_Castelnaud

TaxID: 2951975

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-116
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 47.0 5.40e-01 91.3% 97.9%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.71 57.0 5.46e-01 87.0% 100.0%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.70 58.0 4.75e-01 88.4% 87.6%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.66 57.0 4.03e-01 94.2% 50.0%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 55.0 5.05e-01 89.9% 80.5%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 54.0 4.80e-01 91.3% 79.0%
7kcgA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 51.0 4.17e-01 87.0% 99.2%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.63 53.0 4.23e-01 94.2% 61.7%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.26e-01 94.2% 61.2%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 43.0 4.68e-01 94.2% 94.5%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.34e-01 94.2% 80.2%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.60 54.0 4.52e-01 100.0% 82.9%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.60 52.0 4.49e-01 100.0% 81.2%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.60 53.0 4.31e-01 100.0% 77.4%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 49.0 4.15e-01 94.2% 80.5%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.60 49.0 4.32e-01 91.3% 78.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.44e-01 92.8% 92.5%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.59 50.0 4.32e-01 95.7% 97.3%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 42.0 4.12e-01 75.4% 90.5%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 44.0 3.24e-01 84.1% 72.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.79e-01 100.0% 92.9%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 4.06e-01 98.6% 87.3%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.57 47.0 4.50e-01 91.3% 96.2%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 41.0 3.46e-01 76.8% 63.4%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.57 47.0 4.11e-01 95.7% 90.0%
2wjsA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 41.0 3.12e-01 76.8% 54.7%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 47.0 3.59e-01 100.0% 39.4%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 40.0 3.51e-01 76.8% 74.5%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.66e-01 91.3% 88.1%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.38e-01 100.0% 79.1%
2djhA00 3.30.2310.30 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › Colicin E5 C-terminal ribonuclease domain (CRD) 0.54 43.0 3.89e-01 89.9% 62.5%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.67e-01 92.8% 84.4%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.69e-01 94.2% 85.6%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.77e-01 97.1% 86.6%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 2.86e-01 84.1% 49.6%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 40.0 3.02e-01 81.2% 45.2%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.61e-01 97.1% 79.5%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 3.02e-01 84.1% 55.6%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.53 48.0 3.20e-01 100.0% 74.5%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 40.0 3.04e-01 82.6% 40.5%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 45.0 3.81e-01 97.1% 93.2%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.52 45.0 4.00e-01 95.7% 96.9%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.40e-01 97.1% 74.1%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.65e-01 92.8% 96.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 41.0 4.25e-01 89.9% 93.8%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 3.29e-01 88.4% 45.1%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 43.0 3.29e-01 100.0% 73.2%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 41.0 4.25e-01 92.8% 92.4%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.52e-01 97.1% 83.3%
2wsuA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.48e-01 97.1% 82.0%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.46e-01 97.1% 82.1%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.50 37.0 3.73e-01 100.0% 78.1%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.72 48.0 5.49e-01 94.2% 96.0%
3275991 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 60.0 4.86e-01 94.2% 67.4%
4178260 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.70 57.0 5.30e-01 87.0% 98.8%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.70 49.0 5.59e-01 98.6% 100.0%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.70 48.0 5.32e-01 98.6% 90.9%
3244907 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 57.0 5.25e-01 89.9% 77.8%
4964699 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.69 54.0 4.78e-01 84.1% 82.0%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 48.0 5.47e-01 94.2% 100.0%
3217617 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 57.0 4.74e-01 94.2% 80.0%
3172489 220.1.1.91 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Spo7_2_N 0.67 57.0 3.78e-01 92.8% 69.6%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.67 46.0 5.14e-01 97.1% 94.2%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.66 46.0 4.75e-01 97.1% 76.9%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.65 47.0 4.25e-01 100.0% 54.7%
3939926 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 4.47e-01 94.2% 66.4%
3743239 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 55.0 4.04e-01 94.2% 57.8%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.65 44.0 4.23e-01 97.1% 61.3%
3533318 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 41.0 4.71e-01 88.4% 90.0%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.64 49.0 4.55e-01 98.6% 65.9%
3244836 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 4.38e-01 94.2% 75.6%
3198048 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 55.0 3.84e-01 94.2% 73.5%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 5.19e-01 100.0% 95.0%
3702239 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 51.0 4.20e-01 91.3% 80.0%
5014724 295.1.1.51 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.63 43.0 3.76e-01 98.6% 48.0%
3408641 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 53.0 4.38e-01 95.7% 72.3%
3418960 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 48.0 3.50e-01 84.1% 83.0%
3940504 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.63 53.0 3.79e-01 95.7% 51.6%
3979962 9.1.1.69 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BigA_N 0.63 50.0 4.73e-01 88.4% 83.5%
3980228 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 46.0 3.90e-01 100.0% 44.8%
3871253 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.62 50.0 4.02e-01 89.9% 61.4%
3635127 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 47.0 4.93e-01 94.2% 93.3%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.15e-01 100.0% 57.9%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 42.0 4.61e-01 92.8% 90.9%
3698484 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 53.0 4.04e-01 94.2% 74.2%
3779830 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.59 45.0 4.20e-01 97.1% 64.4%
3193239 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.59 50.0 3.04e-01 94.2% 32.7%
4023315 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 52.0 4.80e-01 100.0% 78.9%
55 1.1.5.31 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 0.58 44.0 3.28e-01 84.1% 75.8%
3490032 1.1.7.45 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th 0.58 50.0 4.23e-01 100.0% 68.3%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.58 40.0 4.25e-01 95.7% 90.9%
1676514 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.58 49.0 3.02e-01 91.3% 25.7%
1879626 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.58 49.0 3.34e-01 91.3% 42.0%
3936038 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.58 47.0 4.07e-01 92.8% 79.6%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.58 44.0 3.77e-01 100.0% 49.6%
3479384 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 3.46e-01 94.2% 51.4%
3601994 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 45.0 3.55e-01 89.9% 47.0%
3556601 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.57 45.0 4.68e-01 98.6% 93.8%
3480491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.42e-01 94.2% 81.3%
3885050 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.57 43.0 3.27e-01 100.0% 33.1%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 49.0 4.80e-01 100.0% 96.0%
3639842 5.1.4.321 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.56 49.0 2.99e-01 100.0% 91.8%
3741960 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.56 46.0 2.93e-01 89.9% 32.4%
5059099 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.55 49.0 4.52e-01 100.0% 90.9%
3480143 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.54 44.0 3.54e-01 94.2% 85.3%
3488117 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 46.0 3.55e-01 100.0% 72.9%
2462227 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.54 46.0 3.70e-01 94.2% 85.0%
4485519 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 46.0 3.98e-01 95.7% 85.5%
29947 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 45.0 3.62e-01 92.8% 84.4%
4998989 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.53 39.0 2.61e-01 78.3% 57.8%
3245739 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 44.0 3.37e-01 94.2% 67.6%
185765 5084.5.1.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DUF4595 0.53 48.0 3.20e-01 100.0% 74.5%
3544925 4.1.1.50 ↗ beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.53 45.0 3.96e-01 100.0% 62.7%
3283544 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.53 43.0 3.05e-01 95.7% 42.0%
2722036 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 45.0 3.59e-01 97.1% 82.3%
4028731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 42.0 4.27e-01 100.0% 96.9%
2521867 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.96e-01 100.0% 71.4%
3508738 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.51 43.0 3.49e-01 97.1% 84.3%