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ON453903.1__WAK79727.1__X__00050

Bact-Vir

ON453903.1__WAK79727.1__X__00050

Identity

Accession:
ON453903 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

Taxonomy

Flavonifractor_phage_Castelnaud

TaxID: 2951975

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-64
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 64.0 5.90e-01 100.0% 68.8%
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 66.0 6.22e-01 100.0% 84.7%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.76 62.0 6.12e-01 100.0% 85.7%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 56.0 5.91e-01 100.0% 98.0%
2d5vA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 63.0 5.69e-01 100.0% 75.9%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 56.0 5.37e-01 100.0% 77.5%
3me5A01 1.10.260.140 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.69 56.0 5.46e-01 100.0% 82.8%
2jvwA01 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.68 55.0 5.52e-01 100.0% 90.0%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 52.0 3.94e-01 100.0% 35.2%
5dvwA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 54.0 4.33e-01 100.0% 59.1%
6vhyA02 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.64 48.0 4.60e-01 88.1% 69.1%
2g80A02 1.10.720.60 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.57 47.0 4.42e-01 100.0% 84.6%
3qybA03 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.52 43.0 3.46e-01 100.0% 50.0%
3gmsA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 42.0 2.96e-01 100.0% 27.3%
2etjA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 43.0 3.07e-01 100.0% 83.3%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.51 42.0 3.21e-01 100.0% 54.4%
4gytA00 1.20.120.740 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 0.51 41.0 3.11e-01 100.0% 40.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281381 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 75.0 6.12e-01 100.0% 68.6%
2627770 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.80 71.0 6.80e-01 100.0% 91.2%
5012960 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 69.0 6.02e-01 100.0% 66.7%
4031838 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 66.0 6.03e-01 100.0% 71.2%
3587817 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 66.0 6.60e-01 100.0% 93.3%
363971 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.76 67.0 5.97e-01 100.0% 70.9%
3588628 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.76 63.0 6.36e-01 100.0% 94.8%
4034164 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 65.0 5.17e-01 100.0% 49.6%
1867991 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 65.0 5.93e-01 100.0% 77.5%
4979322 101.1.2.140 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.65 45.0 4.31e-01 74.6% 61.4%
3189345 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 41.0 3.93e-01 72.9% 55.7%
3884711 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 42.0 4.10e-01 74.6% 61.5%
3901880 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 39.0 3.80e-01 72.9% 61.5%
3467989 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 39.0 3.90e-01 72.9% 75.0%
3285884 103.1.1.127 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RelA_AH_RIS 0.55 45.0 4.32e-01 100.0% 80.0%
3221803 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.55 43.0 3.94e-01 88.1% 63.7%
5041744 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.54 37.0 2.79e-01 72.9% 44.4%
3711705 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.54 37.0 3.36e-01 74.6% 92.2%
3366917 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.54 37.0 3.78e-01 86.4% 78.2%
5051912 632.3.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain 0.53 39.0 3.81e-01 79.7% 100.0%
3248700 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.51 38.0 3.19e-01 81.4% 61.8%
3222373 605.4.1.18 ↗ alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF29357 0.51 43.0 3.90e-01 100.0% 82.4%
220107 635.1.1.1 ↗ alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 0.51 41.0 3.11e-01 100.0% 40.1%