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ON453904.1__WAK79783.1__X__00049
Bact-VirON453904.1__WAK79783.1__X__00049
Identity
- Accession:
- ON453904 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-41
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rp0A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 45.0 | 2.71e-01 | 97.1% | 8.9% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.66 | 55.0 | 3.64e-01 | 97.1% | 49.4% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 57.0 | 4.08e-01 | 100.0% | 35.0% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.01e-01 | 88.6% | 95.8% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.07e-01 | 100.0% | 87.4% |
| 1kpgD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 46.0 | 2.70e-01 | 77.1% | 26.9% |
| 3s6pG00 | 6.10.140.1660 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 53.0 | 4.32e-01 | 100.0% | 62.5% |
| 2kbzA00 | 1.10.246.150 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.64 | 51.0 | 3.85e-01 | 100.0% | 52.5% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.63 | 48.0 | 3.07e-01 | 100.0% | 15.5% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 3.92e-01 | 100.0% | 80.0% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 3.34e-01 | 100.0% | 49.0% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.61 | 49.0 | 3.31e-01 | 100.0% | 26.4% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.60 | 39.0 | 3.16e-01 | 88.6% | 30.9% |
| 4acoA02 | 1.10.443.20 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 | 0.60 | 50.0 | 2.90e-01 | 100.0% | 10.5% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.57e-01 | 100.0% | 76.4% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.49e-01 | 100.0% | 75.6% |
| 5ovnA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 46.0 | 3.52e-01 | 100.0% | 50.0% |
| 3g5sA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 2.62e-01 | 100.0% | 42.5% |
| 3cwvA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 45.0 | 3.14e-01 | 100.0% | 71.5% |
| 3pvsA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 39.0 | 3.27e-01 | 85.7% | 36.8% |
| 7po9A01 | 3.40.1800.20 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › | 0.56 | 44.0 | 3.31e-01 | 100.0% | 36.0% |
| 3lm2A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 46.0 | 3.20e-01 | 100.0% | 32.3% |
| 6rqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.55 | 47.0 | 2.85e-01 | 100.0% | 20.7% |
| 2wteA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 3.56e-01 | 97.1% | 95.8% |
| 1t57A00 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.54 | 41.0 | 2.62e-01 | 94.3% | 16.2% |
| 3cqcA00 | 1.20.190.50 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.53 | 40.0 | 2.49e-01 | 94.3% | 13.8% |
| 3nowA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 39.0 | 2.37e-01 | 100.0% | 10.3% |
| 5u4nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 2.63e-01 | 100.0% | 12.0% |
| 4hltA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 2.81e-01 | 97.1% | 66.3% |
| 1jr3A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 2.76e-01 | 100.0% | 60.2% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3673003 | 3922.1.1.254 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › NET2A_C | 0.70 | 59.0 | 4.05e-01 | 100.0% | 51.2% |
| 5064040 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 58.0 | 3.60e-01 | 100.0% | 32.2% |
| 3183367 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.68 | 58.0 | 3.43e-01 | 100.0% | 15.9% |
| 3655694 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.68 | 54.0 | 4.31e-01 | 100.0% | 41.2% |
| 5048519 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.67 | 52.0 | 3.63e-01 | 100.0% | 24.6% |
| 4928633 | 101.1.2.18 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e | 0.67 | 56.0 | 4.08e-01 | 100.0% | 88.6% |
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.67 | 54.0 | 4.85e-01 | 97.1% | 66.0% |
| 3388480 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 46.0 | 3.60e-01 | 74.3% | 92.0% |
| 4017591 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.66 | 52.0 | 4.11e-01 | 94.3% | 95.0% |
| 3979933 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.66 | 51.0 | 3.92e-01 | 97.1% | 71.6% |
| 5022395 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.65 | 53.0 | 3.49e-01 | 97.1% | 49.1% |
| 3384684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 3.95e-01 | 97.1% | 97.6% |
| 4588125 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.64 | 50.0 | 4.05e-01 | 100.0% | 85.0% |
| 4941986 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.63 | 47.0 | 3.87e-01 | 94.3% | 82.5% |
| 3198004 | 108.1.1.26 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 | 0.63 | 49.0 | 3.58e-01 | 88.6% | 36.0% |
| 3575885 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.63 | 45.0 | 3.30e-01 | 94.3% | 28.4% |
| 4961645 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.62 | 51.0 | 3.94e-01 | 100.0% | 76.7% |
| 3993742 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.62 | 51.0 | 3.52e-01 | 100.0% | 38.5% |
| 3387117 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.62 | 47.0 | 3.91e-01 | 100.0% | 85.0% |
| 3280300 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.62 | 46.0 | 3.72e-01 | 100.0% | 75.6% |
| 3968946 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.61 | 46.0 | 3.79e-01 | 100.0% | 80.0% |
| 4979216 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 3.51e-01 | 88.6% | 94.4% |
| 3966780 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 3.71e-01 | 100.0% | 75.6% |
| 5035389 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 3.65e-01 | 94.3% | 88.2% |
| 3905499 | 633.7.1.5 ↗ | alpha bundles › Bromodomain-like › Bacillus cereus metalloprotein-like › Bacillus cereus metalloprotein-like › Piezo_TM1-24 | 0.60 | 48.0 | 3.39e-01 | 100.0% | 41.6% |
| 4940103 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 45.0 | 3.89e-01 | 100.0% | 88.6% |
| 3411113 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 45.0 | 2.95e-01 | 94.3% | 17.8% |
| 5073598 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.58 | 45.0 | 3.53e-01 | 94.3% | 96.7% |
| 4167856 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.58 | 46.0 | 3.67e-01 | 100.0% | 88.2% |
| 3970001 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 44.0 | 3.59e-01 | 100.0% | 75.6% |
| 3965190 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.58 | 49.0 | 4.10e-01 | 100.0% | 75.4% |
| 370290 | 242.2.1.3 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_end_N3 | 0.58 | 43.0 | 3.83e-01 | 88.6% | 50.9% |
| 4975263 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.58 | 46.0 | 3.73e-01 | 100.0% | 91.8% |
| 3213440 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 44.0 | 2.96e-01 | 100.0% | 24.1% |
| 3396475 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.58 | 40.0 | 3.13e-01 | 74.3% | 77.5% |
| 3611714 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 44.0 | 3.23e-01 | 88.6% | 39.0% |
| 5081885 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 3.65e-01 | 100.0% | 43.8% |
| 3955695 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.56 | 43.0 | 3.21e-01 | 94.3% | 80.9% |
| 3186235 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 44.0 | 4.09e-01 | 100.0% | 72.0% |
| 4999891 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.54 | 41.0 | 3.12e-01 | 100.0% | 30.5% |
| 3937737 | 4215.1.1.0 ↗ | alpha arrays › SOCS box-like › SOCS box-like › SOCS box-like | 0.52 | 44.0 | 3.84e-01 | 91.4% | 68.0% |
| 3594777 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 39.0 | 2.91e-01 | 88.6% | 51.6% |
| 3327035 | 3959.1.1.1 ↗ | alpha duplicates or obligate multimers › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Hikeshi-like_C | 0.50 | 35.0 | 3.34e-01 | 94.3% | 61.8% |
| 3826090 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.50 | 42.0 | 3.14e-01 | 94.3% | 48.2% |