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ON453905.1__WAK79859.1__X__00023

Bact-Vir

ON453905.1__WAK79859.1__X__00023

Identity

Accession:
ON453905 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Flavonifractor_phage_Cormatin

TaxID: 2951977

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-191
PDB
Domain cluster: rep: IMGVR_UViG_3300020814_000341-3300020814-Ga0214088_182449110__D102-238
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1at3A00 3.20.16.10 Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain 0.74 55.0 5.05e-01 91.4% 61.3%
1o6eA00 3.20.16.10 Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain 0.66 54.0 4.96e-01 90.3% 67.1%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 31.0 4.27e-01 92.0% 92.8%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 30.0 4.19e-01 88.6% 91.7%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 33.0 4.29e-01 92.6% 91.5%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 29.0 3.90e-01 90.3% 87.2%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 27.0 3.83e-01 89.7% 88.9%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 29.0 3.69e-01 90.3% 79.6%
5wy8B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.79e-01 89.7% 78.6%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.58 33.0 4.03e-01 89.1% 85.7%
2e7vA01 3.30.70.960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain 0.58 35.0 4.28e-01 89.1% 96.2%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.58 28.0 4.02e-01 84.6% 100.0%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 29.0 3.78e-01 94.3% 86.8%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 28.0 3.83e-01 90.3% 96.2%
3cedA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 30.0 3.88e-01 100.0% 87.8%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 31.0 3.73e-01 88.6% 83.3%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 33.0 4.11e-01 90.3% 94.4%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 28.0 3.62e-01 90.3% 87.8%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 29.0 3.43e-01 84.6% 70.5%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 28.0 3.71e-01 100.0% 92.2%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 32.0 3.99e-01 90.3% 95.3%
1lg7A00 3.10.460.10 Alpha Beta › Roll › VSV matrix protein › VSV matrix protein 0.54 35.0 3.61e-01 93.7% 68.3%
2rb7A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 32.0 3.96e-01 90.3% 94.4%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 29.0 3.68e-01 100.0% 92.8%
1dj0A01 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.53 39.0 4.33e-01 88.6% 97.8%
1cg2A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 32.0 3.92e-01 90.3% 96.4%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 28.0 3.53e-01 90.3% 89.7%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.52 39.0 4.26e-01 88.6% 95.1%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.52 32.0 3.76e-01 90.3% 91.3%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 30.0 3.74e-01 89.7% 95.2%
3ct9A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 30.0 3.76e-01 90.3% 94.4%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083161 50.1.1.3 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 0.85 63.0 6.91e-01 85.7% 90.3%
3954964 50.1.1.3 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 0.83 65.0 7.19e-01 91.4% 97.2%
5039158 50.1.1.3 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 0.79 69.0 7.29e-01 96.0% 98.8%
4032431 50.1.1.3 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 0.79 61.0 6.49e-01 86.9% 89.7%
3585229 50.1.1.2 ↗ beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 0.77 60.0 6.70e-01 88.6% 100.0%
3256920 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 36.0 4.25e-01 82.9% 73.6%
4112759 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.63 33.0 4.25e-01 100.0% 87.0%
4032433 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.63 33.0 4.34e-01 100.0% 91.6%
4502129 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.62 33.0 4.17e-01 100.0% 87.0%
3386440 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 28.0 4.06e-01 89.7% 96.0%
3840001 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.61 30.0 4.13e-01 100.0% 94.1%
136544 304.8.1.8 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.61 29.0 4.08e-01 89.7% 96.2%
4611510 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.60 29.0 3.85e-01 98.9% 83.2%
4190012 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.60 35.0 3.22e-01 90.3% 43.6%
4547137 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.60 31.0 4.15e-01 99.4% 97.6%
4460422 304.8.1.8 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.60 28.0 3.92e-01 89.7% 93.8%
4116290 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.60 33.0 4.09e-01 100.0% 89.0%
4187183 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.60 31.0 3.94e-01 99.4% 85.0%
3284562 304.8.1.9 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.59 28.0 3.89e-01 90.3% 90.6%
4662593 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 31.0 4.08e-01 100.0% 92.6%
3510650 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 31.0 3.92e-01 100.0% 85.9%
4518565 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 32.0 4.11e-01 100.0% 93.7%
4181826 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 32.0 4.01e-01 100.0% 89.0%
4065918 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 30.0 4.02e-01 100.0% 93.3%
4124818 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 30.0 3.91e-01 99.4% 91.1%
4934927 304.19.1.0 ↗ a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain 0.58 31.0 4.08e-01 90.9% 100.0%
4364438 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 30.0 3.97e-01 100.0% 90.4%
3285170 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 29.0 3.86e-01 100.0% 91.8%
4342212 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 31.0 3.96e-01 99.4% 90.5%
4403911 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 31.0 3.89e-01 99.4% 87.0%
4377299 304.18.1.0 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS 0.58 33.0 4.13e-01 93.7% 92.4%
4467967 206.1.3.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 0.58 35.0 2.97e-01 98.3% 34.1%
5067263 304.8.1.96 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26798 0.58 28.0 3.81e-01 90.3% 92.9%
4291007 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 31.0 3.95e-01 100.0% 90.8%
4401827 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 30.0 4.00e-01 99.4% 95.6%
4064787 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 29.0 3.90e-01 100.0% 90.5%
4565255 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 30.0 3.91e-01 97.1% 94.4%
4506415 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 31.0 3.83e-01 99.4% 85.6%
4615209 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 30.0 3.87e-01 100.0% 90.5%
3970195 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 28.0 3.68e-01 91.4% 84.2%
4321703 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 30.0 3.89e-01 99.4% 91.6%
4061575 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 28.0 3.74e-01 100.0% 90.0%
4119510 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 30.0 3.85e-01 99.4% 89.0%
4236755 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 29.0 3.76e-01 100.0% 89.4%
4246888 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 39.0 3.44e-01 89.7% 48.4%
5067082 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 38.0 3.35e-01 90.3% 45.3%
4036271 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 30.0 3.82e-01 100.0% 90.0%
4105300 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 30.0 3.84e-01 99.4% 92.6%
4308216 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.55 28.0 3.60e-01 100.0% 85.3%
4049287 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.55 30.0 3.68e-01 100.0% 81.8%
4274127 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.55 30.0 3.80e-01 99.4% 89.9%
4936296 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.55 38.0 3.31e-01 90.3% 45.3%
4250299 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.80e-01 100.0% 89.5%
4064154 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.70e-01 99.4% 89.0%
4196383 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 29.0 3.73e-01 99.4% 90.0%
4478722 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 30.0 3.63e-01 100.0% 84.8%
4069712 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.54 35.0 3.40e-01 90.9% 56.5%
4074612 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 29.0 3.65e-01 100.0% 90.5%
4437415 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 29.0 3.72e-01 100.0% 93.7%
4219826 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.53 40.0 3.58e-01 90.3% 54.4%
3426109 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 31.0 3.79e-01 98.9% 90.0%
4672169 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.53 40.0 3.55e-01 90.3% 55.1%
4376759 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.53 40.0 3.63e-01 90.3% 57.9%
4563560 304.8.1.5 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.53 29.0 3.50e-01 100.0% 80.0%
4475204 304.102.1.3 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.51 40.0 3.50e-01 90.3% 55.8%
4025670 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.50 31.0 3.60e-01 92.0% 87.5%