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ON453905.1__WAK79882.1__X__00046
Bact-VirON453905.1__WAK79882.1__X__00046
Identity
- Accession:
- ON453905 ↗
- Kingdom:
- phage
Quality
80.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 61.0 | 5.98e-01 | 100.0% | 71.2% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 58.0 | 5.98e-01 | 100.0% | 81.1% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 53.0 | 5.35e-01 | 100.0% | 75.4% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 5.39e-01 | 100.0% | 87.8% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.69 | 45.0 | 3.80e-01 | 100.0% | 40.2% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 42.0 | 3.13e-01 | 100.0% | 26.7% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 54.0 | 4.15e-01 | 92.9% | 42.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.16e-01 | 100.0% | 54.2% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.63 | 42.0 | 4.31e-01 | 100.0% | 72.2% |
| 1z9fA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 42.0 | 3.67e-01 | 87.5% | 44.9% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.61 | 48.0 | 4.00e-01 | 100.0% | 48.1% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.61 | 54.0 | 4.47e-01 | 100.0% | 56.7% |
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 45.0 | 4.29e-01 | 96.4% | 68.2% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.61 | 46.0 | 2.92e-01 | 85.7% | 73.5% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.07e-01 | 100.0% | 60.0% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 41.0 | 3.21e-01 | 100.0% | 30.9% |
| 3fxzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 41.0 | 3.43e-01 | 82.1% | 41.8% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 47.0 | 3.46e-01 | 100.0% | 33.1% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 38.0 | 2.78e-01 | 96.4% | 21.8% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.56 | 43.0 | 3.44e-01 | 100.0% | 39.0% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 45.0 | 3.31e-01 | 100.0% | 31.9% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 39.0 | 3.07e-01 | 100.0% | 31.5% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.12e-01 | 98.2% | 70.3% |
| 1n2bB02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.53 | 43.0 | 3.57e-01 | 92.9% | 90.4% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.52 | 42.0 | 3.86e-01 | 91.1% | 97.4% |
| 1bf5A02 | 2.60.40.630 | Mainly Beta › Sandwich › Immunoglobulin-like › STAT transcription factor, DNA-binding domain | 0.52 | 43.0 | 3.28e-01 | 96.4% | 77.6% |
| 3uk2A02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.51 | 41.0 | 3.43e-01 | 91.1% | 98.1% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 42.0 | 3.07e-01 | 91.1% | 40.0% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 41.0 | 3.60e-01 | 91.1% | 92.1% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.51 | 40.0 | 3.25e-01 | 91.1% | 86.7% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 40.0 | 3.10e-01 | 96.4% | 38.3% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.48e-01 | 100.0% | 76.3% |
| 1ufvA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.51 | 40.0 | 3.43e-01 | 92.9% | 98.0% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.50 | 39.0 | 3.38e-01 | 98.2% | 51.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3392130 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.87 | 64.0 | 6.12e-01 | 100.0% | 67.7% |
| 3847592 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.85 | 62.0 | 3.56e-01 | 100.0% | 9.3% |
| 3928430 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.85 | 63.0 | 5.82e-01 | 100.0% | 62.9% |
| 3879653 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.84 | 61.0 | 5.61e-01 | 100.0% | 61.4% |
| 3922679 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.83 | 57.0 | 5.95e-01 | 100.0% | 80.0% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.81 | 57.0 | 5.17e-01 | 100.0% | 56.0% |
| 2126408 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.80 | 58.0 | 5.13e-01 | 100.0% | 53.1% |
| 3416068 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.79 | 60.0 | 4.31e-01 | 100.0% | 29.7% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.79 | 59.0 | 5.65e-01 | 100.0% | 69.2% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.78 | 53.0 | 5.42e-01 | 100.0% | 72.7% |
| 3866038 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.78 | 54.0 | 4.66e-01 | 100.0% | 47.1% |
| 4932609 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 56.0 | 5.36e-01 | 100.0% | 66.2% |
| 4203592 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 56.0 | 5.32e-01 | 100.0% | 67.7% |
| 3952480 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.75 | 48.0 | 5.23e-01 | 87.5% | 80.0% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.75 | 54.0 | 5.34e-01 | 100.0% | 71.7% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 52.0 | 4.42e-01 | 100.0% | 45.3% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.73 | 52.0 | 5.15e-01 | 100.0% | 71.7% |
| 3598125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 53.0 | 4.77e-01 | 100.0% | 57.3% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 55.0 | 5.05e-01 | 100.0% | 63.5% |
| 3989890 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.71 | 46.0 | 4.37e-01 | 92.9% | 56.9% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 54.0 | 4.94e-01 | 100.0% | 63.5% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.70 | 53.0 | 3.83e-01 | 100.0% | 29.7% |
| 4547801 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 49.0 | 4.25e-01 | 100.0% | 46.7% |
| 5032252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 49.0 | 5.22e-01 | 100.0% | 84.0% |
| 3820065 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 4.92e-01 | 100.0% | 76.4% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.68 | 56.0 | 4.20e-01 | 100.0% | 36.4% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.68 | 51.0 | 3.81e-01 | 100.0% | 32.1% |
| 4955420 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.67 | 54.0 | 3.46e-01 | 89.3% | 79.5% |
| 3586876 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 42.0 | 3.73e-01 | 87.5% | 43.5% |
| 4012524 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.65 | 46.0 | 2.85e-01 | 100.0% | 12.0% |
| 3637664 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.64 | 48.0 | 3.81e-01 | 100.0% | 38.3% |
| 4668960 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 4.35e-01 | 100.0% | 47.3% |
| 5047404 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 50.0 | 5.08e-01 | 100.0% | 87.3% |
| 3287567 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.62 | 44.0 | 3.85e-01 | 100.0% | 47.8% |
| 4138563 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.44e-01 | 100.0% | 73.8% |
| 3492016 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.60 | 44.0 | 3.88e-01 | 100.0% | 51.1% |
| 3176702 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.59 | 50.0 | 3.72e-01 | 100.0% | 40.6% |
| 4087011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 51.0 | 4.30e-01 | 100.0% | 60.0% |
| 3998599 | 2003.1.3.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase | 0.56 | 51.0 | 2.93e-01 | 100.0% | 57.1% |
| 3938972 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 44.0 | 4.08e-01 | 94.6% | 66.7% |
| 4614038 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 42.0 | 3.27e-01 | 87.5% | 72.2% |
| 3623534 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 3.84e-01 | 96.4% | 62.2% |
| 3851797 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 41.0 | 3.00e-01 | 89.3% | 58.2% |
| 4937915 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.52 | 43.0 | 3.61e-01 | 94.6% | 69.7% |
| 2925022 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.52 | 37.0 | 3.55e-01 | 92.9% | 66.7% |
| 5052369 | 169.1.1.1 ↗ | alpha complex topology › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › AFOR_C | 0.51 | 39.0 | 2.49e-01 | 96.4% | 68.3% |