←Back to structures
ON456347.1__UTN92968.1__SEA_FINKLE_54__00054
Bact-VirON456347.1__UTN92968.1__SEA_FINKLE_54__00054
Identity
- Accession:
- ON456347 ↗
- Kingdom:
- phage
Quality
68.4
mean pLDDT
Taxonomy
TaxID: 2926099
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-70
Domain cluster:
rep: NC_054437.1__YP_010051055.1__KDJ60_gp66__00039__D3-50
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.81 | 60.0 | 4.70e-01 | 100.0% | 38.8% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 3.77e-01 | 81.4% | 68.0% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.59 | 50.0 | 3.39e-01 | 100.0% | 40.8% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.59 | 46.0 | 4.41e-01 | 100.0% | 77.1% |
| 5undA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 29.0 | 3.01e-01 | 98.3% | 46.3% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 4.02e-01 | 86.4% | 71.0% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 3.96e-01 | 100.0% | 62.6% |
| 4r2qA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 28.0 | 2.45e-01 | 100.0% | 30.7% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.55 | 44.0 | 3.14e-01 | 100.0% | 60.1% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.13e-01 | 98.3% | 95.3% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.98e-01 | 86.4% | 65.4% |
| 4lmoA00 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.54 | 38.0 | 2.60e-01 | 76.3% | 42.2% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 47.0 | 3.82e-01 | 98.3% | 58.0% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.29e-01 | 98.3% | 36.3% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.85e-01 | 91.5% | 68.1% |
| 1u0tB01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.53 | 44.0 | 3.50e-01 | 100.0% | 74.1% |
| 5j60A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 3.15e-01 | 100.0% | 84.3% |
| 4y4mC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 2.99e-01 | 100.0% | 84.7% |
| 3qxyA01 | 3.90.1410.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 | 0.53 | 40.0 | 2.72e-01 | 86.4% | 46.2% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.63e-01 | 100.0% | 57.0% |
| 2v1nA01 | 1.10.10.2030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain | 0.52 | 39.0 | 3.41e-01 | 86.4% | 50.5% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.92e-01 | 100.0% | 74.2% |
| 5adxJ01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 36.0 | 3.10e-01 | 86.4% | 46.2% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.51e-01 | 81.4% | 63.9% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.55e-01 | 91.5% | 75.3% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.51 | 44.0 | 3.63e-01 | 98.3% | 85.2% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 36.0 | 2.97e-01 | 78.0% | 76.5% |
| 2i2cA01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.51 | 42.0 | 3.44e-01 | 100.0% | 63.2% |
| 6qdjA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 42.0 | 3.96e-01 | 98.3% | 93.4% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.10e-01 | 86.4% | 42.6% |
| 1e6vB02 | 1.20.840.10 | Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal | 0.50 | 40.0 | 2.73e-01 | 98.3% | 98.6% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 39.0 | 3.31e-01 | 98.3% | 68.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.76 | 61.0 | 4.95e-01 | 100.0% | 47.3% |
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.74 | 56.0 | 5.82e-01 | 100.0% | 89.1% |
| 3278292 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.62 | 42.0 | 3.60e-01 | 81.4% | 44.2% |
| 3960412 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 51.0 | 3.91e-01 | 96.6% | 46.4% |
| 5065027 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.59 | 49.0 | 3.69e-01 | 91.5% | 42.8% |
| 3212231 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 29.0 | 2.94e-01 | 100.0% | 45.0% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.58 | 51.0 | 4.62e-01 | 98.3% | 73.8% |
| 3951258 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 49.0 | 3.68e-01 | 98.3% | 43.3% |
| 5051534 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 49.0 | 3.47e-01 | 98.3% | 39.5% |
| 3272721 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 3.79e-01 | 98.3% | 53.6% |
| 4991742 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 48.0 | 3.80e-01 | 98.3% | 56.9% |
| 5046626 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 47.0 | 3.52e-01 | 96.6% | 52.9% |
| 4940345 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 47.0 | 3.69e-01 | 98.3% | 63.0% |
| 3819311 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.55 | 46.0 | 3.69e-01 | 96.6% | 62.4% |
| 3979431 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.55 | 47.0 | 3.59e-01 | 100.0% | 45.3% |
| 3434870 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.55 | 44.0 | 4.06e-01 | 91.5% | 77.5% |
| 5031473 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.55 | 47.0 | 3.94e-01 | 98.3% | 60.0% |
| 4975635 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 2.97e-01 | 86.4% | 31.1% |
| 3957963 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.54 | 46.0 | 3.99e-01 | 100.0% | 69.5% |
| 3585702 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.54 | 40.0 | 3.65e-01 | 83.1% | 95.3% |
| 3189966 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 45.0 | 2.99e-01 | 100.0% | 53.8% |
| 4937876 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 46.0 | 3.62e-01 | 98.3% | 50.4% |
| 4978412 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 43.0 | 3.25e-01 | 100.0% | 38.3% |
| 4959927 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 44.0 | 3.29e-01 | 98.3% | 39.4% |
| 4992272 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.55e-01 | 98.3% | 60.0% |
| 2709 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.53 | 43.0 | 3.63e-01 | 100.0% | 57.0% |
| 3664974 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 2.88e-01 | 94.9% | 25.3% |
| 3474961 | 3525.1.1.0 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain | 0.52 | 44.0 | 4.06e-01 | 94.9% | 70.0% |
| 3541293 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.80e-01 | 96.6% | 76.7% |
| 141918 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.52 | 43.0 | 3.27e-01 | 100.0% | 38.8% |
| 3236695 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.31e-01 | 89.8% | 79.2% |
| 4461479 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.51 | 40.0 | 2.83e-01 | 94.9% | 27.0% |
| 4962040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.20e-01 | 91.5% | 40.0% |
| 3676148 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 43.0 | 3.44e-01 | 98.3% | 53.6% |
| 5077445 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.25e-01 | 98.3% | 43.8% |
| 3785111 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.63e-01 | 100.0% | 72.0% |
| 3683223 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 2.60e-01 | 98.3% | 16.1% |
| 3282605 | 101.1.2.508 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25872 | 0.50 | 39.0 | 3.60e-01 | 96.6% | 63.7% |