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ON457558.1__USL89983.1__X__00011

Bact-Vir

ON457558.1__USL89983.1__X__00011

Identity

Accession:
ON457558 ↗
Kingdom:
phage

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-72
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.80 62.0 6.42e-01 100.0% 88.9%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 6.26e-01 98.2% 98.0%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.73 64.0 4.45e-01 100.0% 76.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.58e-01 100.0% 76.2%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.73e-01 86.0% 95.8%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.69 63.0 4.32e-01 100.0% 41.6%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 5.63e-01 100.0% 88.1%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.69 62.0 4.15e-01 100.0% 36.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.69 62.0 4.97e-01 100.0% 56.9%
3kuvB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 53.0 4.06e-01 86.0% 89.5%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.49e-01 100.0% 93.9%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.67 49.0 4.12e-01 100.0% 46.8%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 59.0 5.74e-01 100.0% 93.5%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 58.0 5.55e-01 100.0% 89.6%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.67 58.0 4.51e-01 100.0% 63.0%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 51.0 3.83e-01 87.7% 80.1%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.66 56.0 4.69e-01 100.0% 97.2%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 48.0 4.15e-01 100.0% 50.0%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.01e-01 100.0% 90.4%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.63 54.0 4.16e-01 100.0% 86.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 52.0 5.22e-01 93.0% 93.2%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.61 47.0 3.57e-01 87.7% 76.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 50.0 3.99e-01 94.7% 48.7%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 41.0 3.64e-01 71.9% 52.9%
2gc9B00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 3.79e-01 100.0% 78.9%
7knlA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.59 49.0 4.07e-01 100.0% 79.8%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 48.0 3.65e-01 100.0% 65.8%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.70e-01 100.0% 72.7%
1oh1A00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.58 43.0 3.52e-01 80.7% 78.9%
1nycA00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.58 44.0 3.67e-01 87.7% 74.8%
2v95A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 43.0 3.37e-01 82.5% 66.7%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 42.0 3.30e-01 82.5% 78.9%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 46.0 2.89e-01 96.5% 46.7%
2q1fA04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.55 42.0 3.26e-01 87.7% 91.7%
1jrrA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 42.0 3.37e-01 84.2% 72.1%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 46.0 2.90e-01 96.5% 23.1%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.55 44.0 2.84e-01 96.5% 44.3%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 46.0 2.80e-01 100.0% 86.4%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 48.0 3.01e-01 100.0% 94.9%
3ozqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 42.0 3.06e-01 84.2% 53.3%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 41.0 3.22e-01 89.5% 48.3%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.37e-01 84.2% 87.0%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.59e-01 100.0% 96.9%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.54 45.0 4.06e-01 100.0% 67.1%
2r9yA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 41.0 3.13e-01 87.7% 64.4%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.52 41.0 3.35e-01 91.2% 95.8%
4oevA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 44.0 3.29e-01 96.5% 85.8%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.52 37.0 3.07e-01 78.9% 58.4%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 38.0 3.24e-01 84.2% 52.4%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 38.0 2.63e-01 86.0% 47.5%
3f1sA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 42.0 3.11e-01 94.7% 35.3%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 40.0 3.39e-01 91.2% 52.9%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.50 36.0 2.46e-01 82.5% 100.0%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.50 38.0 2.41e-01 91.2% 22.3%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 37.0 3.21e-01 82.5% 53.7%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
603 4.1.1.62 beta barrels › SH3 › SH3 › SH3 › DUF1811 0.80 62.0 6.47e-01 100.0% 90.6%
4929508 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 59.0 4.52e-01 78.9% 88.8%
4943890 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 60.0 4.51e-01 80.7% 84.4%
4970474 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.79 60.0 4.51e-01 80.7% 87.7%
4028093 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 59.0 4.56e-01 80.7% 92.8%
3609597 4.1.1.236 beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.78 59.0 5.81e-01 100.0% 76.7%
3623874 2.1.1.51 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.78 59.0 4.42e-01 80.7% 86.7%
5048438 2.1.1.51 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.78 58.0 4.33e-01 78.9% 83.7%
5011984 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 58.0 4.51e-01 80.7% 93.3%
4550511 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.76 54.0 5.83e-01 98.2% 95.6%
3308545 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 60.0 4.28e-01 86.0% 33.8%
3505078 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 56.0 4.60e-01 80.7% 81.0%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 6.10e-01 100.0% 88.0%
4995784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.95e-01 100.0% 74.7%
3945489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 58.0 6.15e-01 100.0% 98.0%
5035934 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.73 64.0 6.14e-01 100.0% 84.6%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 66.0 5.51e-01 100.0% 80.0%
3976834 4.1.1.156 beta barrels › SH3 › SH3 › SH3 › DUF2158 0.73 58.0 6.12e-01 100.0% 100.0%
3592075 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.67e-01 100.0% 81.2%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.22e-01 100.0% 61.2%
3936468 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.16e-01 100.0% 55.0%
4930861 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.72 62.0 5.96e-01 100.0% 84.6%
2321269 4.1.1.46 beta barrels › SH3 › SH3 › SH3 › VEG 0.72 63.0 5.58e-01 100.0% 76.2%
3816455 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 64.0 4.91e-01 100.0% 92.0%
3729666 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.08e-01 100.0% 60.9%
3668420 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 63.0 4.36e-01 100.0% 58.9%
3300226 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 64.0 5.67e-01 100.0% 95.0%
4014881 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 6.22e-01 100.0% 96.7%
3708283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.48e-01 100.0% 87.1%
3669214 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 63.0 4.81e-01 100.0% 86.2%
None 0.70 63.0 3.76e-01 100.0% 19.0%
3332609 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 61.0 4.71e-01 96.5% 92.0%
3634374 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 52.0 5.48e-01 100.0% 90.0%
3425872 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 62.0 5.33e-01 100.0% 85.6%
3930014 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 60.0 4.29e-01 94.7% 62.5%
3629316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 63.0 5.16e-01 100.0% 57.0%
3473407 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.54e-01 98.2% 84.0%
4949095 2004.1.1.10 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.68 51.0 3.09e-01 80.7% 79.9%
3795384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 62.0 4.11e-01 100.0% 26.5%
3302391 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.68 61.0 4.54e-01 100.0% 54.3%
3231154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.34e-01 98.2% 98.8%
2448699 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 51.0 4.79e-01 100.0% 67.6%
3482559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 59.0 4.18e-01 100.0% 57.1%
4937423 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.12e-01 100.0% 75.3%
1063578 9.2.1.1 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.66 56.0 4.68e-01 100.0% 97.2%
3204011 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.65 49.0 4.21e-01 100.0% 51.1%
5023947 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.65 52.0 3.72e-01 89.5% 43.5%
3948255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.34e-01 100.0% 60.0%
4943228 1.1.7.146 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn 0.65 48.0 4.66e-01 100.0% 70.8%
4655719 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 55.0 4.73e-01 96.5% 71.1%
4407497 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 48.0 4.66e-01 100.0% 70.8%
3783301 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.59e-01 100.0% 57.1%
4880433 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 48.0 4.51e-01 100.0% 65.7%
5040907 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 55.0 3.58e-01 94.7% 42.6%
3604264 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.44e-01 100.0% 75.0%
3166679 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 50.0 3.08e-01 94.7% 14.9%
5037370 4200.1.1.0 beta barrels › YmcC-like › YmcC-like › YmcC-like 0.59 51.0 3.82e-01 98.2% 83.9%
3173222 4075.1.1.0 a+b complex topology › RGC domain › RGC domain › RGC domain 0.58 47.0 3.83e-01 94.7% 94.8%
3821398 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.57 46.0 2.99e-01 96.5% 35.7%
3819740 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.56 48.0 4.18e-01 98.2% 93.3%
4944430 244.3.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.56 45.0 4.16e-01 96.5% 97.5%
3409941 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.54 45.0 4.24e-01 96.5% 80.0%
4034136 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.54 45.0 2.89e-01 94.7% 38.0%
862 9.4.1.1 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.54 45.0 4.06e-01 100.0% 67.1%
5036626 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 43.0 2.68e-01 94.7% 23.4%
3587129 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 41.0 4.05e-01 91.2% 83.1%
5038660 5.1.3.22 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH 0.53 44.0 2.76e-01 98.2% 91.0%
3979195 274.1.1.35 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.53 43.0 3.47e-01 96.5% 48.8%
3267108 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.52 43.0 2.70e-01 94.7% 26.6%
3266157 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.52 43.0 2.86e-01 98.2% 90.6%
3680499 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.51 41.0 2.31e-01 94.7% 10.3%
3793797 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.51 43.0 2.73e-01 96.5% 30.3%
3273846 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 41.0 2.73e-01 98.2% 19.3%