←Back to structures
ON461912.1__UXQ88737.1__X__00044
Bact-VirON461912.1__UXQ88737.1__X__00044
Identity
- Accession:
- ON461912 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autosignataviridae›
Guangxivirus›
Salmonella_phage_PST_H2
TaxID: 2978975
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-51
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.91 | 83.0 | 6.35e-01 | 100.0% | 48.1% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.62 | 39.0 | 4.53e-01 | 92.0% | 94.3% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.58 | 48.0 | 4.18e-01 | 98.0% | 68.3% |
| 3zvqA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 33.0 | 2.99e-01 | 86.0% | 40.0% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.57 | 44.0 | 3.79e-01 | 96.0% | 94.8% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 3.49e-01 | 72.0% | 69.7% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.67e-01 | 96.0% | 66.1% |
| 2qy6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 2.78e-01 | 90.0% | 45.1% |
| 2xzmW01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.53 | 37.0 | 2.93e-01 | 76.0% | 61.0% |
| 1e50B00 | 2.40.250.10 | Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit | 0.53 | 38.0 | 2.96e-01 | 82.0% | 76.2% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.52 | 44.0 | 3.59e-01 | 98.0% | 84.0% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 39.0 | 3.20e-01 | 90.0% | 74.1% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.51 | 35.0 | 2.68e-01 | 74.0% | 32.3% |
| 1n4kA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 39.0 | 3.08e-01 | 100.0% | 87.2% |
| 5ve3A02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.50 | 34.0 | 2.70e-01 | 72.0% | 84.8% |
| 1q25A02 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.50 | 41.0 | 3.04e-01 | 100.0% | 59.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3691998 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.60 | 40.0 | 3.77e-01 | 84.0% | 53.8% |
| 4963287 | 375.1.1.334 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758 | 0.60 | 48.0 | 4.72e-01 | 96.0% | 94.5% |
| 3874056 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.58 | 41.0 | 4.08e-01 | 78.0% | 94.5% |
| 3387450 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.58 | 47.0 | 3.19e-01 | 92.0% | 45.6% |
| 3591046 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.56 | 46.0 | 2.90e-01 | 100.0% | 34.2% |
| 3987739 | 207.4.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CFSR | 0.53 | 39.0 | 2.54e-01 | 82.0% | 18.3% |
| 3284151 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 40.0 | 3.30e-01 | 88.0% | 81.0% |
| 5037381 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.52 | 35.0 | 3.58e-01 | 74.0% | 78.0% |
| 4187442 | 375.1.1.76 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RRN7 | 0.52 | 35.0 | 3.94e-01 | 74.0% | 100.0% |
| 3970699 | 4167.1.1.0 ↗ | beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain | 0.51 | 39.0 | 2.87e-01 | 88.0% | 91.0% |
| 4335812 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.51 | 38.0 | 3.02e-01 | 84.0% | 39.1% |
| 4003584 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.51 | 36.0 | 3.27e-01 | 76.0% | 57.1% |
| 3684900 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.50 | 40.0 | 3.45e-01 | 92.0% | 75.3% |