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ON461912.1__UXQ88740.1__X__00047
Bact-VirON461912.1__UXQ88740.1__X__00047
Identity
- Accession:
- ON461912 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autosignataviridae›
Guangxivirus›
Salmonella_phage_PST_H2
TaxID: 2978975
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sazA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.79 | 41.0 | 2.73e-01 | 83.3% | 14.2% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 54.0 | 3.90e-01 | 75.9% | 77.0% |
| 3hxlA02 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 51.0 | 4.30e-01 | 75.9% | 62.2% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 49.0 | 4.21e-01 | 74.1% | 45.9% |
| 1nkqB00 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.67 | 50.0 | 3.25e-01 | 81.5% | 58.6% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 44.0 | 3.64e-01 | 70.4% | 60.8% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 44.0 | 3.93e-01 | 74.1% | 58.2% |
| 4mdaA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 46.0 | 3.14e-01 | 79.6% | 21.5% |
| 6kcvA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 47.0 | 3.10e-01 | 81.5% | 38.4% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.61 | 44.0 | 2.70e-01 | 77.8% | 35.2% |
| 3hdoA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 46.0 | 3.38e-01 | 90.7% | 33.1% |
| 3eucA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 47.0 | 3.42e-01 | 90.7% | 32.8% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 44.0 | 2.96e-01 | 81.5% | 44.7% |
| 5jozB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 40.0 | 2.77e-01 | 74.1% | 43.2% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 51.0 | 3.84e-01 | 98.1% | 59.8% |
| 3o9zD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 32.0 | 2.22e-01 | 90.7% | 14.5% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.53 | 41.0 | 2.36e-01 | 81.5% | 26.4% |
| 5vnxA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 46.0 | 3.37e-01 | 94.4% | 76.3% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.53 | 40.0 | 3.41e-01 | 79.6% | 69.5% |
| 4yfbC01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 36.0 | 2.38e-01 | 77.8% | 20.2% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 3.20e-01 | 83.3% | 44.6% |
| 5kvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 35.0 | 2.59e-01 | 75.9% | 57.4% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.50 | 42.0 | 2.99e-01 | 100.0% | 30.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3516548 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.85 | 41.0 | 2.78e-01 | 79.6% | 15.8% |
| 4944328 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.84 | 38.0 | 2.80e-01 | 70.4% | 18.5% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.82 | 46.0 | 3.73e-01 | 75.9% | 32.6% |
| 5053281 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.81 | 41.0 | 3.05e-01 | 83.3% | 21.6% |
| 2817021 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.80 | 45.0 | 3.33e-01 | 83.3% | 24.2% |
| 3782340 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.80 | 52.0 | 4.24e-01 | 77.8% | 37.9% |
| 4482585 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.78 | 41.0 | 2.50e-01 | 88.9% | 9.2% |
| 3931156 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 52.0 | 4.76e-01 | 74.1% | 55.7% |
| 4994238 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.76 | 42.0 | 2.48e-01 | 81.5% | 8.1% |
| 4075924 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 42.0 | 3.25e-01 | 90.7% | 26.1% |
| 3214097 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.73 | 51.0 | 4.33e-01 | 74.1% | 45.9% |
| 3789654 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.72 | 50.0 | 3.99e-01 | 74.1% | 37.1% |
| 3382554 | 2484.1.1.60 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G | 0.72 | 45.0 | 3.61e-01 | 70.4% | 32.4% |
| 3255991 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.72 | 52.0 | 3.15e-01 | 100.0% | 13.2% |
| 3980370 | 241.13.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA | 0.70 | 47.0 | 3.47e-01 | 70.4% | 26.4% |
| 3846927 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 45.0 | 3.79e-01 | 70.4% | 38.9% |
| 3710213 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.67 | 50.0 | 2.98e-01 | 79.6% | 15.7% |
| 3728854 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 44.0 | 4.16e-01 | 70.4% | 58.5% |
| 4014419 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.64 | 47.0 | 2.84e-01 | 79.6% | 37.0% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.64 | 42.0 | 3.86e-01 | 75.9% | 49.3% |
| 3954965 | 873.1.1.7 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd | 0.63 | 48.0 | 3.26e-01 | 83.3% | 80.5% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.63 | 44.0 | 3.37e-01 | 74.1% | 44.0% |
| 3981044 | 867.1.1.1 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas | 0.62 | 43.0 | 2.73e-01 | 98.1% | 14.2% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 42.0 | 3.38e-01 | 75.9% | 34.5% |
| 3748189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 42.0 | 3.73e-01 | 74.1% | 47.5% |
| 3989851 | 11.1.1.1339 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CFSR | 0.61 | 49.0 | 3.58e-01 | 87.0% | 77.2% |
| 4559514 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 4.03e-01 | 75.9% | 84.3% |
| 3378755 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.60 | 49.0 | 3.80e-01 | 90.7% | 100.0% |
| 3822530 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.58 | 47.0 | 3.82e-01 | 96.3% | 49.5% |
| 3418593 | 2004.1.1.406 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PC-Esterase | 0.58 | 38.0 | 2.44e-01 | 83.3% | 14.2% |
| 3988706 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.57 | 40.0 | 3.72e-01 | 75.9% | 98.6% |
| 5072257 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 48.0 | 3.87e-01 | 92.6% | 100.0% |
| 4011809 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.56 | 49.0 | 2.88e-01 | 96.3% | 17.4% |
| 3607863 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 47.0 | 3.91e-01 | 98.1% | 97.9% |
| 4075794 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 41.0 | 2.77e-01 | 85.2% | 31.2% |
| 3561488 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.53 | 41.0 | 2.49e-01 | 83.3% | 47.7% |
| 4614219 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.53 | 40.0 | 2.70e-01 | 85.2% | 30.4% |
| 4438210 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 45.0 | 3.60e-01 | 96.3% | 99.1% |
| 1718030 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.51 | 34.0 | 2.45e-01 | 70.4% | 64.0% |
| 5076734 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.50 | 40.0 | 2.81e-01 | 87.0% | 98.9% |
| 4355722 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 38.0 | 3.30e-01 | 87.0% | 55.8% |