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ON464759.1__UTV60795.1__JDFnp1_7__00007

Bact-Vir

ON464759.1__UTV60795.1__JDFnp1_7__00007

Identity

Accession:
ON464759 ↗
Kingdom:
phage

Quality

60.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fusobacterium_phage_JD-Fnp1

TaxID: 2950463

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 91-189_288-302
PDB
D2 high residues 191-286
PDB
D3 high residues 462-478_511-643
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p7hL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 36.0 4.21e-01 98.0% 83.2%
3zssA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 38.0 4.37e-01 98.7% 85.0%
1x5xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 32.0 3.76e-01 100.0% 73.4%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 24.0 3.67e-01 78.0% 96.7%
4dimA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 34.0 3.02e-01 89.3% 42.5%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 3.97e-01 99.3% 79.0%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.55 32.0 3.78e-01 100.0% 82.5%
6hyfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 32.0 3.68e-01 96.7% 79.2%
1owwA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 30.0 3.69e-01 100.0% 84.9%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 33.0 3.92e-01 99.3% 87.4%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 30.0 3.60e-01 100.0% 80.6%
1ut9A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 33.0 4.00e-01 95.3% 93.9%
8alzB04 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 35.0 4.05e-01 98.0% 90.9%
7u7nA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.74e-01 100.0% 90.7%
3kwuA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 33.0 3.43e-01 100.0% 67.4%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.97e-01 97.3% 92.9%
1yukB01 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.51 27.0 3.54e-01 80.7% 97.4%
1dfxA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.50 30.0 3.25e-01 94.0% 70.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3474603 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.64 33.0 3.54e-01 98.0% 55.6%
4988018 11.24.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal Ig-like domain in baseplate protein ORF48 › N-terminal Ig-like domain in baseplate protein ORF48 › BppU_N 0.64 38.0 4.53e-01 100.0% 88.0%
3604271 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 36.0 4.27e-01 100.0% 88.0%
3398608 11.1.1.197 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RHD_dimer 0.58 36.0 4.18e-01 98.7% 85.5%
4954624 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 4.41e-01 90.7% 92.1%
3249011 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 34.0 3.53e-01 99.3% 64.3%
3408777 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.54 32.0 3.86e-01 98.7% 90.5%
3235941 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 4.28e-01 98.7% 94.2%
3474696 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 32.0 3.01e-01 99.3% 48.3%
3656483 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 36.0 3.75e-01 100.0% 75.0%
3234675 11.1.1.54 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.52 40.0 4.28e-01 100.0% 92.3%
3469605 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.51 40.0 4.27e-01 97.3% 93.8%
3995673 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 33.0 3.50e-01 100.0% 75.4%
D4 high residues 725-843
PDB
Domain cluster: rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.58 36.0 4.21e-01 91.6% 94.7%
1vz8A02 3.10.20.340 Alpha Beta › Roll › Ubiquitin-like (UB roll) › ArgJ beta chain, C-terminal domain 0.52 40.0 4.12e-01 89.9% 86.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957578 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.83 61.0 6.90e-01 90.8% 98.9%
3977755 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.78 55.0 6.33e-01 100.0% 100.0%
4565831 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.78 57.0 6.48e-01 90.8% 100.0%
5004557 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.69 59.0 6.10e-01 90.8% 99.1%
5002740 3228.1.1.0 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III 0.68 58.0 6.00e-01 90.8% 97.3%
4927348 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.62 38.0 4.62e-01 89.9% 98.7%
3313414 229.1.1.7 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N 0.61 43.0 4.82e-01 90.8% 97.8%
3187878 229.1.1.6 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX6_4th 0.60 39.0 4.47e-01 99.2% 92.9%
3209734 229.1.1.7 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N 0.58 42.0 4.55e-01 90.8% 93.7%
3265932 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.58 39.0 4.60e-01 90.8% 97.6%
5048469 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.53 37.0 4.19e-01 92.4% 100.0%