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ON464759.1__UTV60854.1__JDFnp1_66__00066

Bact-Vir

ON464759.1__UTV60854.1__JDFnp1_66__00066

Identity

Accession:
ON464759 ↗
Kingdom:
phage

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 4.64e-01 98.2% 70.0%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.62 49.0 3.85e-01 87.5% 75.0%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 46.0 4.44e-01 82.1% 84.8%
2h5eA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 43.0 3.06e-01 76.8% 26.2%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 42.0 4.02e-01 98.2% 63.2%
3kljA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.60 33.0 2.93e-01 71.4% 36.1%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.60 50.0 3.87e-01 100.0% 82.9%
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 45.0 4.25e-01 89.3% 67.1%
4ncdA02 2.60.40.3970 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 3.71e-01 78.6% 97.7%
2w3oB00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 42.0 3.51e-01 76.8% 71.3%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 43.0 2.64e-01 78.6% 17.0%
3qwuA01 3.10.450.740 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 4.24e-01 75.0% 91.5%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.58 45.0 4.03e-01 87.5% 63.9%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.57 40.0 2.86e-01 83.9% 23.1%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 47.0 3.75e-01 94.6% 75.6%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 40.0 2.43e-01 83.9% 10.5%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 45.0 4.21e-01 96.4% 74.0%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.11e-01 100.0% 70.3%
7kz9B01 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.56 45.0 3.29e-01 94.6% 78.7%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.80e-01 100.0% 60.2%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 39.0 2.88e-01 76.8% 73.0%
1p5tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.81e-01 100.0% 66.0%
2fe0A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 41.0 3.33e-01 82.1% 80.4%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 44.0 3.95e-01 96.4% 89.5%
2r6uA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 3.06e-01 78.6% 46.7%
4fajA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.53 44.0 3.51e-01 96.4% 94.4%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.33e-01 100.0% 70.6%
7vcoA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 38.0 2.86e-01 76.8% 56.0%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.40e-01 100.0% 75.2%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.53 42.0 3.32e-01 94.6% 40.6%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 43.0 3.88e-01 98.2% 89.4%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 43.0 3.29e-01 100.0% 72.5%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 3.76e-01 98.2% 59.3%
5hl8C00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.52 36.0 3.26e-01 73.2% 83.5%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 38.0 2.52e-01 85.7% 52.1%
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.31e-01 83.9% 73.7%
3lhoA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.52 38.0 2.56e-01 80.4% 19.2%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 38.0 3.62e-01 80.4% 75.8%
1y8qB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 38.0 2.60e-01 82.1% 72.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 3.71e-01 89.3% 89.3%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 40.0 3.84e-01 89.3% 85.3%
4bc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 40.0 2.60e-01 92.9% 87.7%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 41.0 2.81e-01 98.2% 33.9%
2nooA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 36.0 2.42e-01 78.6% 64.6%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.51 37.0 3.10e-01 80.4% 72.6%
7z6eA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.36e-01 100.0% 73.0%
6iw6B01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.51 43.0 2.96e-01 100.0% 46.8%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.38e-01 83.9% 39.4%
2jzkA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.51 39.0 3.32e-01 89.3% 61.2%
3qijB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.60e-01 96.4% 75.3%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 38.0 2.87e-01 83.9% 81.5%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.29e-01 98.2% 59.7%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.32e-01 96.4% 70.1%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3411471 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 45.0 2.72e-01 76.8% 9.7%
3500755 304.55.1.14 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp 0.70 60.0 4.02e-01 94.6% 73.8%
5007378 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.68 50.0 5.07e-01 92.9% 78.2%
4247937 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 57.0 4.62e-01 100.0% 77.3%
3173156 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.64 46.0 4.14e-01 94.6% 55.0%
4622893 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 48.0 3.96e-01 83.9% 94.0%
3255741 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.62 54.0 3.84e-01 100.0% 35.0%
3177736 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 50.0 2.94e-01 91.1% 16.4%
3443078 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.62 46.0 3.30e-01 100.0% 26.3%
3191004 5.1.4.223 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.61 46.0 2.53e-01 82.1% 17.6%
None 0.61 46.0 2.58e-01 82.1% 19.6%
3200199 5.1.4.223 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.60 45.0 2.55e-01 82.1% 19.0%
1527468 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.59 46.0 3.77e-01 100.0% 44.1%
3843359 4.1.1.246 beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.59 43.0 3.83e-01 98.2% 52.9%
3692668 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 44.0 2.73e-01 82.1% 37.7%
3451633 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.59 38.0 3.85e-01 75.0% 67.3%
3608325 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 44.0 2.67e-01 83.9% 26.0%
3573803 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 42.0 2.68e-01 80.4% 14.3%
3688114 5.1.4.100 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.58 45.0 2.60e-01 83.9% 27.1%
3205533 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 50.0 4.05e-01 100.0% 97.3%
3781440 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.57 41.0 3.78e-01 98.2% 56.2%
3703932 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 46.0 4.56e-01 98.2% 83.3%
3788985 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 48.0 3.66e-01 100.0% 63.4%
3783021 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.57 38.0 3.03e-01 75.0% 32.5%
5048278 1056.1.1.1 a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD 0.57 41.0 2.81e-01 78.6% 52.3%
3929256 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.57 46.0 3.65e-01 100.0% 80.0%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 49.0 3.78e-01 100.0% 72.3%
3990213 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.56 47.0 3.99e-01 100.0% 65.0%
3407322 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.56 46.0 3.96e-01 100.0% 71.0%
3607901 2004.1.1.427 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.55 43.0 2.68e-01 91.1% 25.3%
3981308 11.2.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › IcmF_C 0.55 40.0 3.42e-01 82.1% 81.9%
3781450 220.1.1.95 beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH 0.55 46.0 3.60e-01 98.2% 50.0%
3575385 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 45.0 3.90e-01 100.0% 71.0%
3912125 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.55 45.0 3.88e-01 100.0% 64.0%
3731706 5.1.4.298 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.55 42.0 2.56e-01 85.7% 35.3%
3929231 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.61e-01 98.2% 53.1%
3629974 220.1.1.52 beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.54 45.0 3.86e-01 100.0% 71.0%
3630687 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.43e-01 100.0% 50.0%
3995459 210.1.1.1 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.54 45.0 3.03e-01 100.0% 25.9%
3401931 220.1.1.184 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.54 44.0 3.88e-01 100.0% 71.6%
4942807 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.54 44.0 4.42e-01 96.4% 100.0%
4008035 223.1.1.112 a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 0.54 42.0 2.76e-01 89.3% 97.1%
3487326 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.54 44.0 4.26e-01 100.0% 90.8%
3233461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.24e-01 96.4% 88.3%
3517903 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 44.0 3.49e-01 98.2% 54.6%
3616622 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.30e-01 98.2% 87.3%
3294025 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 38.0 3.90e-01 82.1% 87.3%
4332533 220.1.1.12 beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.53 43.0 3.05e-01 100.0% 32.3%
4939655 4099.1.1.53 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF1828 0.53 38.0 3.17e-01 83.9% 80.8%
2998571 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.53 45.0 2.86e-01 100.0% 24.4%
1294396 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 43.0 3.29e-01 100.0% 71.1%
3698212 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 44.0 2.74e-01 96.4% 43.6%
3784283 319.1.1.6 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › Pih1_fungal_CS 0.52 42.0 3.79e-01 92.9% 97.6%
3619347 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.22e-01 85.7% 60.9%
3991514 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 41.0 3.29e-01 100.0% 91.4%
3948977 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 42.0 3.43e-01 92.9% 92.7%
3451705 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 38.0 2.99e-01 85.7% 50.7%
1155745 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 41.0 3.14e-01 98.2% 56.0%
4928896 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 41.0 3.47e-01 98.2% 85.5%
3638713 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 42.0 2.53e-01 100.0% 55.6%
3306172 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 38.0 3.04e-01 89.3% 51.4%
3928361 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.51 41.0 3.20e-01 98.2% 67.9%
3265225 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 42.0 2.67e-01 100.0% 51.5%
3778135 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.50 41.0 3.15e-01 98.2% 48.7%
3393795 77.1.1.3 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 0.50 36.0 2.42e-01 80.4% 92.7%
None 0.50 38.0 3.13e-01 89.3% 60.0%
3446884 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.89e-01 96.4% 78.6%