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ON464759.1__UTV60861.1__JDFnp1_73__00073
Bact-VirON464759.1__UTV60861.1__JDFnp1_73__00073
Identity
- Accession:
- ON464759 ↗
- Kingdom:
- phage
Quality
72.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 31-146
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.62 | 41.0 | 4.63e-01 | 85.3% | 89.8% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.60 | 33.0 | 3.71e-01 | 100.0% | 68.9% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.81e-01 | 71.6% | 75.2% |
| 1m61A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 32.0 | 3.43e-01 | 83.6% | 62.5% |
| 1nrvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 32.0 | 3.45e-01 | 84.5% | 64.0% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 31.0 | 3.65e-01 | 83.6% | 76.2% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 41.0 | 4.16e-01 | 95.7% | 77.9% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 32.0 | 3.43e-01 | 87.9% | 65.0% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 31.0 | 3.02e-01 | 84.5% | 50.8% |
| 1celA00 | 2.70.100.10 | Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain | 0.55 | 43.0 | 2.90e-01 | 83.6% | 59.8% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 31.0 | 3.31e-01 | 87.9% | 62.5% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 31.0 | 3.29e-01 | 87.9% | 64.0% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 26.0 | 3.68e-01 | 76.7% | 96.4% |
| 1i3zA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 31.0 | 3.27e-01 | 87.9% | 63.1% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 28.0 | 3.43e-01 | 81.0% | 78.7% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 28.0 | 3.60e-01 | 95.7% | 92.1% |
| 3us4A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 30.0 | 3.22e-01 | 87.9% | 64.9% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.52 | 26.0 | 3.22e-01 | 79.3% | 77.6% |
| 2l4vA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 46.0 | 4.43e-01 | 100.0% | 87.4% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 41.0 | 3.30e-01 | 84.5% | 79.6% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.51 | 29.0 | 3.41e-01 | 81.0% | 80.0% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 42.0 | 3.80e-01 | 93.1% | 66.2% |
| 4o89A02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.50 | 34.0 | 3.70e-01 | 85.3% | 86.2% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.50 | 42.0 | 4.00e-01 | 93.1% | 89.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955327 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 33.0 | 4.51e-01 | 81.9% | 100.0% |
| 3633647 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.65 | 30.0 | 3.89e-01 | 95.7% | 76.9% |
| 3797523 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 38.0 | 3.73e-01 | 99.1% | 54.6% |
| 3408937 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 31.0 | 3.60e-01 | 93.1% | 66.3% |
| 3549045 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 38.0 | 3.89e-01 | 99.1% | 64.5% |
| 4216985 | 331.19.1.2 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N | 0.61 | 34.0 | 3.91e-01 | 100.0% | 74.1% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.60 | 46.0 | 3.42e-01 | 87.9% | 33.2% |
| None | — | 0.60 | 49.0 | 3.36e-01 | 87.9% | 38.0% | |
| 2755883 | 331.19.1.1 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin | 0.59 | 33.0 | 3.66e-01 | 100.0% | 67.4% |
| 3755862 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 33.0 | 3.68e-01 | 87.1% | 67.4% |
| 3225530 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.59 | 43.0 | 2.89e-01 | 87.9% | 20.5% |
| 3616668 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.58 | 45.0 | 3.08e-01 | 87.9% | 23.5% |
| 5005406 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 46.0 | 3.49e-01 | 85.3% | 44.3% |
| 4602126 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 32.0 | 3.36e-01 | 84.5% | 58.2% |
| 3219425 | 5.1.3.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 | 0.58 | 38.0 | 3.78e-01 | 90.5% | 62.4% |
| 3997534 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.57 | 32.0 | 3.18e-01 | 84.5% | 52.5% |
| 2987316 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 32.0 | 3.19e-01 | 84.5% | 53.7% |
| 4322510 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 34.0 | 3.55e-01 | 91.4% | 66.7% |
| 5009473 | 243.3.1.77 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Ta0938 | 0.55 | 44.0 | 4.63e-01 | 85.3% | 98.1% |
| 3935139 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 31.0 | 2.90e-01 | 87.9% | 43.4% |
| 2807015 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 32.0 | 3.25e-01 | 84.5% | 57.9% |
| 3769735 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 32.0 | 3.41e-01 | 87.1% | 66.0% |
| 3433209 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.55 | 32.0 | 3.36e-01 | 87.1% | 62.9% |
| 3528458 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.55 | 32.0 | 3.41e-01 | 87.1% | 66.0% |
| 3258975 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.55 | 32.0 | 3.49e-01 | 87.1% | 68.0% |
| 4079647 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 32.0 | 3.49e-01 | 87.9% | 68.0% |
| 3549076 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.54 | 32.0 | 3.42e-01 | 87.1% | 65.7% |
| 3691378 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 3.06e-01 | 88.8% | 41.9% |
| 6667 | 4221.1.1.1 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › DUF1797 | 0.53 | 29.0 | 3.43e-01 | 80.2% | 78.2% |
| 1560911 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 31.0 | 2.98e-01 | 87.9% | 49.6% |
| 3734097 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 37.0 | 2.56e-01 | 88.8% | 21.5% |
| 3690953 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 39.0 | 4.12e-01 | 90.5% | 90.3% |
| 4670897 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 37.0 | 3.45e-01 | 91.4% | 60.7% |
| 3213942 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.51 | 31.0 | 3.22e-01 | 87.9% | 63.6% |
| 4002401 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.51 | 31.0 | 3.28e-01 | 87.9% | 67.6% |
| 3988075 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 2.93e-01 | 87.9% | 37.1% |
D2
medium
residues 147-209