←Back to structures
ON464764.1__UTV61195.1__JDFnp4_17__00017
Bact-VirON464764.1__UTV61195.1__JDFnp4_17__00017
Identity
- Accession:
- ON464764 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.71 | 52.0 | 3.66e-01 | 93.2% | 25.1% |
| 2od1A00 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 42.0 | 4.51e-01 | 71.2% | 82.0% |
| 3cegA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 41.0 | 2.62e-01 | 98.3% | 14.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.56 | 45.0 | 3.59e-01 | 100.0% | 91.7% |
| 1cboA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 40.0 | 2.53e-01 | 78.0% | 63.0% |
| 1e7lA01 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.55 | 38.0 | 3.44e-01 | 72.9% | 76.2% |
| 6scxC01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.55 | 40.0 | 2.99e-01 | 81.4% | 57.6% |
| 1gcyA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 41.0 | 2.59e-01 | 86.4% | 33.1% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.54 | 43.0 | 3.48e-01 | 94.9% | 99.2% |
| 2gicD02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.52 | 36.0 | 2.56e-01 | 72.9% | 86.2% |
| 2o6yA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.52 | 39.0 | 2.68e-01 | 96.6% | 24.1% |
| 1s9iA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 38.0 | 2.63e-01 | 79.7% | 78.2% |
| 4gnfA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 37.0 | 3.23e-01 | 79.7% | 78.1% |
| 4ba0A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 38.0 | 2.40e-01 | 86.4% | 26.7% |
| 2crwA00 | 1.10.220.150 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Arf GTPase activating protein | 0.50 | 40.0 | 3.13e-01 | 94.9% | 69.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276133 | 377.9.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-HIT | 0.66 | 41.0 | 4.16e-01 | 81.4% | 63.3% |
| 3492984 | 377.9.1.9 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 | 0.59 | 40.0 | 4.03e-01 | 76.3% | 68.3% |
| 3921605 | 377.9.1.9 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 | 0.59 | 40.0 | 3.20e-01 | 76.3% | 35.7% |
| 3196340 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 43.0 | 3.00e-01 | 83.1% | 80.3% |
| 8219 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.56 | 38.0 | 4.26e-01 | 88.1% | 89.4% |
| 164734 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.55 | 40.0 | 4.24e-01 | 78.0% | 94.0% |
| 3706461 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 40.0 | 3.24e-01 | 78.0% | 41.8% |
| 3484067 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.53 | 44.0 | 3.40e-01 | 98.3% | 93.8% |
| 3595297 | 633.3.1.0 ↗ | alpha bundles › Bromodomain-like › Mob1/phocein › Mob1/phocein | 0.52 | 35.0 | 2.45e-01 | 71.2% | 24.1% |
| 3781281 | 377.9.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-Mss51 | 0.50 | 39.0 | 3.69e-01 | 93.2% | 68.0% |
| 3747332 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.50 | 45.0 | 2.77e-01 | 100.0% | 74.5% |
| 3855777 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.50 | 44.0 | 2.76e-01 | 100.0% | 76.0% |
D2
high
residues 66-228
D3
high
residues 240-364
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 30.0 | 3.54e-01 | 87.2% | 69.9% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 23.0 | 3.35e-01 | 92.8% | 91.7% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 29.0 | 3.32e-01 | 87.2% | 66.3% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 23.0 | 3.26e-01 | 92.8% | 95.7% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 26.0 | 3.27e-01 | 72.8% | 76.7% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 23.0 | 3.05e-01 | 84.0% | 78.3% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 24.0 | 3.07e-01 | 92.8% | 77.4% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 26.0 | 3.37e-01 | 88.8% | 89.2% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.52 | 25.0 | 3.34e-01 | 72.8% | 100.0% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 29.0 | 2.91e-01 | 87.2% | 50.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.71e-01 | 94.4% | 86.5% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 23.0 | 3.19e-01 | 88.8% | 98.0% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.51 | 25.0 | 3.25e-01 | 91.2% | 98.1% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 30.0 | 3.54e-01 | 77.6% | 89.9% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 23.0 | 2.95e-01 | 84.0% | 74.2% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 31.0 | 3.58e-01 | 97.6% | 86.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.57 | 29.0 | 3.51e-01 | 85.6% | 77.3% |
| 3938589 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.56 | 24.0 | 3.39e-01 | 83.2% | 92.0% |
| 3326980 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.56 | 28.0 | 3.63e-01 | 77.6% | 93.3% |
| 3238405 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 26.0 | 3.49e-01 | 70.4% | 92.7% |
| 5074749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 27.0 | 3.33e-01 | 89.6% | 75.7% |
| 3684908 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.54 | 29.0 | 3.47e-01 | 94.4% | 82.7% |
| 3229601 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.53 | 24.0 | 3.21e-01 | 88.0% | 83.3% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.53 | 27.0 | 3.24e-01 | 86.4% | 72.5% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.52 | 28.0 | 3.39e-01 | 94.4% | 82.7% |
| 4027422 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.52 | 25.0 | 3.29e-01 | 72.0% | 94.5% |
| 3795121 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.52 | 27.0 | 3.37e-01 | 90.4% | 89.2% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 21.0 | 2.80e-01 | 88.0% | 69.1% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.51 | 23.0 | 3.17e-01 | 84.8% | 96.0% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 21.0 | 2.75e-01 | 76.0% | 66.7% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.50 | 26.0 | 3.20e-01 | 91.2% | 82.9% |
| 3620094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 25.0 | 3.22e-01 | 75.2% | 96.4% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.50 | 24.0 | 3.12e-01 | 86.4% | 86.7% |