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ON470578.1__URC08653.1__X__00003

Bact-Vir

ON470578.1__URC08653.1__X__00003

Identity

Accession:
ON470578 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.79 72.0 6.47e-01 100.0% 86.4%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.78 69.0 6.62e-01 100.0% 90.0%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.76 67.0 5.31e-01 100.0% 75.6%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 6.09e-01 100.0% 80.3%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 6.31e-01 100.0% 88.9%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.21e-01 100.0% 47.2%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 68.0 5.28e-01 100.0% 48.8%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.74 66.0 5.15e-01 100.0% 74.0%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.04e-01 100.0% 46.0%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.46e-01 100.0% 61.5%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 6.07e-01 100.0% 88.0%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.57e-01 100.0% 70.0%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 6.16e-01 100.0% 93.3%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 5.85e-01 100.0% 80.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.31e-01 100.0% 58.0%
3nqoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 65.0 4.61e-01 100.0% 34.5%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.68e-01 100.0% 71.8%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.69e-01 100.0% 72.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.53e-01 100.0% 67.4%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 6.15e-01 100.0% 92.2%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.16e-01 100.0% 68.9%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.90e-01 100.0% 85.3%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.48e-01 100.0% 67.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.92e-01 100.0% 90.6%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 63.0 6.09e-01 100.0% 90.9%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.95e-01 100.0% 87.1%
1oyiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.83e-01 98.3% 96.8%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.97e-01 100.0% 90.9%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.58e-01 100.0% 92.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.03e-01 100.0% 58.4%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 61.0 5.62e-01 100.0% 92.3%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.75e-01 100.0% 96.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.01e-01 100.0% 64.8%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 4.61e-01 100.0% 46.1%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.37e-01 100.0% 71.8%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.74e-01 100.0% 89.9%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.39e-01 100.0% 79.2%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.98e-01 100.0% 79.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 4.92e-01 100.0% 59.0%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.65 44.0 4.14e-01 71.7% 57.9%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 53.0 4.35e-01 98.3% 80.8%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 47.0 4.28e-01 83.3% 69.9%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 42.0 3.81e-01 83.3% 77.8%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.57 45.0 3.30e-01 86.7% 37.6%
4xpkA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 44.0 3.53e-01 100.0% 39.7%
1jo0A00 3.30.110.60 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like 0.54 43.0 3.84e-01 100.0% 58.8%
2yxlA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.53 36.0 3.66e-01 70.0% 72.4%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 36.0 3.43e-01 71.7% 60.0%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 36.0 3.43e-01 71.7% 70.3%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 43.0 3.27e-01 100.0% 37.0%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.51 42.0 2.79e-01 95.0% 67.0%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 39.0 3.77e-01 95.0% 74.3%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063200 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 73.0 6.46e-01 100.0% 75.3%
3842720 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 6.29e-01 95.0% 85.0%
3695413 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.79 72.0 6.02e-01 100.0% 76.0%
4588402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 71.0 6.56e-01 100.0% 92.0%
4980512 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.59e-01 100.0% 89.2%
4026467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 6.55e-01 100.0% 92.9%
3373156 101.1.2.77 alpha arrays › HTH › HTH › winged helix domain › ESCRT-II 0.76 69.0 6.28e-01 100.0% 87.3%
4960424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 6.61e-01 100.0% 96.9%
4977904 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 6.63e-01 100.0% 95.0%
4077877 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.76 67.0 4.92e-01 100.0% 38.1%
4956853 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 5.51e-01 100.0% 63.5%
5048761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 68.0 6.45e-01 100.0% 84.3%
4986010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 68.0 4.60e-01 100.0% 30.2%
4959061 101.1.2.169 alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 0.74 59.0 5.60e-01 100.0% 74.3%
4933315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 5.95e-01 100.0% 76.2%
4204492 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.51e-01 100.0% 74.3%
3615681 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 4.72e-01 100.0% 47.3%
4954891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.40e-01 100.0% 57.1%
3926382 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 6.32e-01 100.0% 90.8%
3738688 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.73 65.0 6.00e-01 100.0% 78.7%
3721121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 5.21e-01 100.0% 57.0%
4942820 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 6.20e-01 100.0% 95.0%
4982742 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 6.38e-01 100.0% 93.8%
5046905 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 5.64e-01 100.0% 81.1%
5047400 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.72 65.0 6.01e-01 100.0% 80.0%
5038436 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.69e-01 100.0% 72.5%
4112271 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 5.16e-01 100.0% 68.0%
3785111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 64.0 5.37e-01 100.0% 77.0%
4033346 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.71 63.0 5.39e-01 100.0% 62.1%
4023459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.76e-01 100.0% 78.8%
5052340 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.91e-01 100.0% 92.9%
3618436 101.1.2.77 alpha arrays › HTH › HTH › winged helix domain › ESCRT-II 0.71 62.0 5.78e-01 100.0% 93.3%
4928166 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.92e-01 95.0% 98.2%
4943132 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.45e-01 100.0% 68.2%
4965091 101.1.2.908 alpha arrays › HTH › HTH › winged helix domain › DUF5787 0.70 57.0 5.27e-01 100.0% 68.8%
4389399 101.1.2.304 alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.70 59.0 5.71e-01 100.0% 84.3%
3816507 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.69 62.0 5.62e-01 100.0% 75.0%
4992272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 4.91e-01 100.0% 61.7%
3508627 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.60e-01 100.0% 80.0%
4945921 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 60.0 5.75e-01 100.0% 91.4%
3217591 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 5.25e-01 100.0% 73.7%
3246176 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 4.85e-01 86.7% 65.3%
3269533 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.51e-01 100.0% 93.3%
3958992 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.68 47.0 4.28e-01 71.7% 55.0%
5065253 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.68 57.0 5.16e-01 100.0% 68.8%
3737673 101.1.2.311 alpha arrays › HTH › HTH › winged helix domain › RNA12 0.68 58.0 4.99e-01 100.0% 59.0%
5082110 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 61.0 6.11e-01 98.3% 100.0%
3205602 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.66 57.0 5.01e-01 100.0% 64.4%
3273680 101.1.2.151 alpha arrays › HTH › HTH › winged helix domain › COR 0.66 56.0 5.11e-01 100.0% 91.8%
3636290 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.66 57.0 5.28e-01 100.0% 80.0%
4158600 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.66 58.0 4.39e-01 100.0% 42.8%
5026329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.84e-01 100.0% 100.0%
4523274 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.65 45.0 3.14e-01 71.7% 24.6%
3434870 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.63 55.0 5.06e-01 98.3% 82.5%
5018084 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.31e-01 100.0% 77.1%
5052686 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.57 38.0 2.48e-01 71.7% 14.2%
4029899 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.56 47.0 3.02e-01 100.0% 24.6%
4582873 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.54 37.0 3.55e-01 71.7% 70.0%
3236950 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.54 46.0 4.43e-01 100.0% 87.1%
3252861 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.52 40.0 2.73e-01 83.3% 24.2%
4011359 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.51 38.0 3.02e-01 83.3% 96.4%