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ON470608.1__URC09922.1__X__00017

Bact-Vir

ON470608.1__URC09922.1__X__00017

Identity

Accession:
ON470608 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-116
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.72 60.0 5.87e-01 98.9% 84.0%
5ee2A00 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.70 63.0 5.79e-01 100.0% 83.6%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.70 63.0 6.04e-01 100.0% 92.5%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 61.0 5.46e-01 100.0% 94.0%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 60.0 5.44e-01 100.0% 75.0%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.66 51.0 4.30e-01 81.9% 66.9%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 58.0 4.85e-01 100.0% 62.2%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.62 55.0 4.78e-01 100.0% 77.9%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 53.0 4.67e-01 98.9% 79.7%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.61 55.0 3.99e-01 98.9% 89.6%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.60 45.0 4.74e-01 77.7% 100.0%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 42.0 3.42e-01 100.0% 39.1%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 4.57e-01 85.1% 89.5%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.59 51.0 4.40e-01 100.0% 60.0%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.24e-01 78.7% 84.9%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.59 42.0 3.70e-01 93.6% 51.1%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.58 46.0 4.03e-01 87.2% 78.3%
3bvxA04 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.58 53.0 3.69e-01 98.9% 78.9%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.58 46.0 3.30e-01 89.4% 96.4%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 48.0 3.52e-01 90.4% 41.8%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.57 51.0 4.08e-01 97.9% 76.1%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 48.0 3.57e-01 91.5% 82.5%
1cb8A02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 51.0 3.79e-01 100.0% 95.5%
2wjsA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 42.0 3.32e-01 76.6% 57.9%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.57 41.0 4.22e-01 94.7% 78.9%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.57 39.0 4.36e-01 84.0% 93.0%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 46.0 3.38e-01 88.3% 40.7%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 4.34e-01 100.0% 81.9%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 45.0 4.08e-01 87.2% 81.5%
7xr9E01 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 47.0 3.78e-01 96.8% 91.9%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.55 49.0 3.49e-01 100.0% 72.3%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 48.0 3.62e-01 97.9% 73.9%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 4.05e-01 96.8% 62.4%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.54 46.0 4.09e-01 100.0% 84.9%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.53 46.0 3.76e-01 96.8% 75.3%
2jheA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 42.0 4.10e-01 88.3% 79.6%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 47.0 3.77e-01 98.9% 84.0%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 45.0 3.96e-01 100.0% 80.9%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 47.0 4.21e-01 100.0% 81.5%
1mwsA04 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 44.0 3.17e-01 98.9% 100.0%
1ei5A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 42.0 2.99e-01 90.4% 91.9%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 43.0 3.12e-01 93.6% 85.3%
4fe9A02 2.60.40.3620 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.82e-01 83.0% 99.1%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 43.0 3.16e-01 93.6% 88.7%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.52 41.0 3.45e-01 86.2% 89.8%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 38.0 3.05e-01 77.7% 73.9%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.83e-01 85.1% 80.9%
5swiD01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 46.0 3.41e-01 100.0% 77.5%
1d8hA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.51 42.0 3.00e-01 90.4% 61.8%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.63e-01 83.0% 90.0%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 43.0 3.96e-01 92.6% 85.0%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 41.0 2.87e-01 93.6% 87.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3972703 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.72 64.0 6.24e-01 100.0% 90.5%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.71 64.0 5.48e-01 100.0% 78.0%
1700261 5084.1.1.13 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HpuA 0.70 63.0 5.79e-01 100.0% 83.6%
3777334 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.70 63.0 5.29e-01 100.0% 69.8%
3977969 9.11.1.0 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like 0.69 61.0 5.85e-01 100.0% 84.5%
3754415 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.69 63.0 5.24e-01 100.0% 68.4%
2900291 71.1.1.11 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PNGase_F-II_N 0.68 49.0 3.88e-01 77.7% 38.5%
4382398 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.68 47.0 4.10e-01 71.3% 96.4%
1545158 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.68 62.0 5.24e-01 100.0% 71.7%
3459971 5084.5.3.9 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › PF28611 0.68 44.0 3.03e-01 71.3% 20.7%
4195832 9.1.1.24 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.67 60.0 5.37e-01 97.9% 96.9%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 56.0 5.03e-01 90.4% 70.8%
1063623 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.65 57.0 5.09e-01 100.0% 97.8%
3866573 12.3.1.42 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.64 49.0 3.41e-01 79.8% 59.3%
3664957 5084.5.1.57 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 0.64 43.0 2.90e-01 73.4% 19.1%
5032559 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 54.0 5.48e-01 96.8% 100.0%
5000263 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 46.0 3.54e-01 76.6% 84.6%
3999576 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 46.0 3.97e-01 77.7% 87.6%
5014493 331.3.1.12 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like 0.61 52.0 3.86e-01 91.5% 51.3%
5051984 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 46.0 4.18e-01 77.7% 92.5%
2027 12.3.1.17 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › RhgB_N 0.61 55.0 3.99e-01 98.9% 90.0%
3510850 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.61 52.0 5.34e-01 94.7% 100.0%
4293129 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.60 45.0 3.28e-01 78.7% 76.4%
3788776 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.60 44.0 2.96e-01 76.6% 29.3%
4014909 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.60 54.0 4.15e-01 100.0% 76.9%
3736649 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.59 54.0 4.23e-01 100.0% 93.3%
5043752 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 44.0 3.21e-01 77.7% 40.0%
3174935 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 43.0 2.86e-01 76.6% 30.0%
4934001 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.59 49.0 4.44e-01 88.3% 84.0%
3513651 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.59 44.0 4.15e-01 97.9% 66.4%
4419937 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.59 41.0 4.34e-01 74.5% 81.2%
4278307 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.58 51.0 4.04e-01 96.8% 78.9%
4188109 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.57 49.0 3.36e-01 92.6% 74.7%
3394516 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.57 52.0 4.52e-01 100.0% 65.3%
2755883 331.19.1.1 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin 0.57 42.0 4.29e-01 97.9% 79.3%
4012990 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.56 44.0 3.69e-01 87.2% 70.4%
4128674 4252.1.1.3 beta barrels › AttH-like › AttH-like › AttH-like › DA_C 0.56 51.0 3.90e-01 100.0% 58.1%
4172290 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.56 46.0 4.18e-01 90.4% 81.5%
3702318 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 48.0 3.73e-01 100.0% 76.5%
3392728 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.56 42.0 3.83e-01 79.8% 82.4%
3280614 4295.1.1.2 beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › DUF2071 0.55 47.0 3.63e-01 100.0% 87.8%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 48.0 4.02e-01 100.0% 85.1%
2442100 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.55 46.0 4.07e-01 90.4% 79.4%
3468940 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 44.0 2.97e-01 86.2% 28.7%
4879580 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.54 47.0 3.99e-01 94.7% 77.1%
3846916 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.54 43.0 4.05e-01 96.8% 70.4%
3915194 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 44.0 3.02e-01 90.4% 88.6%
3215406 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.54 47.0 2.98e-01 94.7% 89.9%
3699727 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 44.0 3.02e-01 92.6% 92.7%
4566858 5084.5.1.10 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.54 48.0 3.31e-01 100.0% 51.7%
4954761 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.53 49.0 4.49e-01 100.0% 77.5%
3702063 331.9.1.5 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf 0.53 41.0 3.93e-01 88.3% 71.6%
3325704 5.1.4.222 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.53 46.0 3.13e-01 97.9% 46.5%
1153941 243.4.1.2 a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N 0.52 32.0 3.19e-01 97.9% 57.3%
3810543 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.52 42.0 3.99e-01 98.9% 74.5%
5068508 4059.1.1.1 a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.52 46.0 3.00e-01 95.7% 48.2%
3461718 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 43.0 3.25e-01 90.4% 63.9%
3630390 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.51 42.0 2.87e-01 90.4% 46.7%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 45.0 4.00e-01 95.7% 84.4%
4027842 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.51 42.0 2.88e-01 90.4% 32.4%
3765027 5.1.4.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.51 43.0 2.88e-01 92.6% 44.6%
3388787 719.1.1.1 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.50 43.0 3.97e-01 96.8% 84.8%