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ON470620.1__URC10465.1__X__00014
Bact-VirON470620.1__URC10465.1__X__00014
Identity
- Accession:
- ON470620 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Taxonomy
TaxID: 2946098
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-100_259-275
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14491.12 best | DUF4435 | 43.1 | 6.30e-11 | 88.2% | 36.5% |
CATH (68)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bk0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.67 | 55.0 | 4.20e-01 | 88.2% | 99.2% |
| 2v25A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.67 | 45.0 | 4.73e-01 | 73.6% | 75.2% |
| 1d5wA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 53.0 | 5.19e-01 | 89.1% | 92.7% |
| 3gv0A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 51.0 | 4.83e-01 | 89.1% | 88.2% |
| 3kloA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 50.0 | 4.66e-01 | 89.1% | 85.4% |
| 4o5aA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 51.0 | 4.84e-01 | 93.6% | 88.6% |
| 1bmtA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.60 | 49.0 | 4.38e-01 | 89.1% | 82.3% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.60 | 51.0 | 4.70e-01 | 92.7% | 97.2% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 45.0 | 4.77e-01 | 89.1% | 92.8% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 46.0 | 4.03e-01 | 86.4% | 77.8% |
| 3hcwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 49.0 | 4.58e-01 | 93.6% | 88.6% |
| 1dqnA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 45.0 | 3.63e-01 | 84.5% | 72.6% |
| 2jjmA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 47.0 | 4.05e-01 | 89.1% | 98.3% |
| 2zwiB02 | 3.40.50.11110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, C-terminal GT-B Rossman nucleotide-binding domain | 0.58 | 49.0 | 4.44e-01 | 94.5% | 93.5% |
| 4am8E01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.58 | 47.0 | 4.14e-01 | 89.1% | 74.9% |
| 2x7xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 47.0 | 4.52e-01 | 89.1% | 87.7% |
| 4ru1A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 46.0 | 4.19e-01 | 85.5% | 77.0% |
| 3l49A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 4.41e-01 | 88.2% | 89.9% |
| 3bblA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 48.0 | 4.51e-01 | 93.6% | 88.4% |
| 7e7gA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 45.0 | 3.53e-01 | 86.4% | 57.7% |
| 4kxvA02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.57 | 47.0 | 3.93e-01 | 90.0% | 67.5% |
| 3om0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 41.0 | 3.70e-01 | 77.3% | 96.2% |
| 2hqbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 45.0 | 4.33e-01 | 88.2% | 88.5% |
| 4evqA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 44.0 | 3.97e-01 | 84.5% | 77.8% |
| 5ahkA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 46.0 | 3.88e-01 | 89.1% | 79.3% |
| 1y7pB02 | 3.40.50.10550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein af1403; domain 2 | 0.56 | 48.0 | 4.51e-01 | 95.5% | 96.4% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.56 | 45.0 | 4.12e-01 | 88.2% | 83.2% |
| 2o1eB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 46.0 | 4.13e-01 | 88.2% | 78.1% |
| 1ixcA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 45.0 | 4.68e-01 | 87.3% | 94.0% |
| 3ly1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 45.0 | 3.67e-01 | 89.1% | 64.9% |
| 2z9vA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 44.0 | 3.49e-01 | 86.4% | 62.6% |
| 2pgnA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.56 | 45.0 | 3.84e-01 | 88.2% | 87.2% |
| 3kkeB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 47.0 | 4.35e-01 | 93.6% | 81.2% |
| 1ofuX00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 3.91e-01 | 73.6% | 72.9% |
| 2dr1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 45.0 | 3.51e-01 | 87.3% | 60.2% |
| 1pq4A01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.56 | 46.0 | 4.13e-01 | 89.1% | 79.6% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 3.90e-01 | 87.3% | 80.8% |
| 2q5cA02 | 3.40.50.10660 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PrpR receptor domain-like | 0.55 | 36.0 | 3.93e-01 | 70.0% | 81.1% |
| 2cb0A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 44.0 | 4.02e-01 | 88.2% | 77.6% |
| 4rk0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.22e-01 | 89.1% | 85.8% |
| 2ihuA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.55 | 44.0 | 3.77e-01 | 88.2% | 88.6% |
| 2lciA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 47.0 | 4.41e-01 | 96.4% | 91.0% |
| 1g19A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.47e-01 | 87.3% | 66.1% |
| 1m32A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 43.0 | 3.46e-01 | 90.0% | 54.1% |
| 2ebjA00 | 3.40.630.20 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Peptidase C15, pyroglutamyl peptidase I-like | 0.54 | 43.0 | 3.66e-01 | 88.2% | 99.5% |
| 3r44A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 45.0 | 3.12e-01 | 92.7% | 75.1% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.88e-01 | 90.0% | 82.2% |
| 3islA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 43.0 | 3.43e-01 | 90.0% | 62.2% |
| 2x7jA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 43.0 | 3.61e-01 | 89.1% | 71.8% |
| 3mw8A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 41.0 | 4.10e-01 | 84.5% | 99.1% |
| 3hwwA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 42.0 | 3.55e-01 | 88.2% | 65.7% |
| 1mdbA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.76e-01 | 85.5% | 62.0% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 4.01e-01 | 88.2% | 92.6% |
| 1gvnD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.42e-01 | 93.6% | 74.4% |
| 1zzgA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 42.0 | 3.70e-01 | 87.3% | 80.5% |
| 4qysA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 34.0 | 3.51e-01 | 85.5% | 68.3% |
| 3f0hA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 42.0 | 3.29e-01 | 90.0% | 50.4% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 4.15e-01 | 87.3% | 90.0% |
| 7e76B01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 41.0 | 3.51e-01 | 87.3% | 72.8% |
| 3na8A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 3.32e-01 | 96.4% | 47.8% |
| 4lw2A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 43.0 | 3.34e-01 | 93.6% | 53.3% |
| 7wgrA03 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.51 | 44.0 | 4.16e-01 | 93.6% | 94.7% |
| 3g0tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 43.0 | 3.58e-01 | 95.5% | 80.2% |
| 3l84A03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 4.20e-01 | 94.5% | 95.8% |
| 2prsA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.50 | 40.0 | 4.04e-01 | 89.1% | 97.4% |
| 2ynmC02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.50 | 41.0 | 3.84e-01 | 89.1% | 87.1% |
| 3tauA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.86e-01 | 90.0% | 88.0% |
| 3vaxA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 42.0 | 3.25e-01 | 93.6% | 54.0% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3725290 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.69 | 57.0 | 4.64e-01 | 90.0% | 94.8% |
| 5037512 | 2006.1.3.9 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › OLD-like_TOPRIM | 0.69 | 60.0 | 6.00e-01 | 94.5% | 99.1% |
| 3663935 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 53.0 | 5.10e-01 | 89.1% | 93.8% |
| 3278239 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 52.0 | 4.85e-01 | 89.1% | 86.4% |
| 4129373 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.62 | 51.0 | 4.74e-01 | 90.0% | 93.6% |
| 5066560 | 205.1.1.120 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › FlpD | 0.60 | 48.0 | 4.08e-01 | 84.5% | 62.9% |
| 5065245 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.60 | 49.0 | 4.42e-01 | 90.0% | 92.9% |
| 4975383 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.59 | 48.0 | 4.11e-01 | 88.2% | 69.4% |
| 4154217 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 52.0 | 4.42e-01 | 100.0% | 88.4% |
| 5045562 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.59 | 48.0 | 4.52e-01 | 89.1% | 97.0% |
| 3390077 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.58 | 44.0 | 3.98e-01 | 81.8% | 100.0% |
| 5010556 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.58 | 46.0 | 3.46e-01 | 86.4% | 50.7% |
| 3366498 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.58 | 46.0 | 4.19e-01 | 88.2% | 86.5% |
| 4109899 | 7591.1.1.1 ↗ | a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK | 0.57 | 39.0 | 3.91e-01 | 70.0% | 73.9% |
| 3472776 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.57 | 40.0 | 3.71e-01 | 72.7% | 77.2% |
| 4385737 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.57 | 48.0 | 4.44e-01 | 94.5% | 87.6% |
| 4939180 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.57 | 40.0 | 3.01e-01 | 72.7% | 46.8% |
| 3408206 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 42.0 | 3.78e-01 | 79.1% | 99.4% |
| 4945972 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.57 | 48.0 | 3.77e-01 | 93.6% | 76.7% |
| 3703402 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.56 | 45.0 | 4.18e-01 | 89.1% | 78.6% |
| 3278297 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.56 | 46.0 | 4.51e-01 | 90.0% | 99.2% |
| 3290057 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.56 | 45.0 | 4.43e-01 | 88.2% | 94.2% |
| 9676 | 2004.1.1.108 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SulA | 0.56 | 40.0 | 3.91e-01 | 73.6% | 72.9% |
| 5076202 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.56 | 45.0 | 3.33e-01 | 89.1% | 43.2% |
| 4948004 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.56 | 46.0 | 3.57e-01 | 90.0% | 54.0% |
| 5048770 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.56 | 44.0 | 3.78e-01 | 88.2% | 87.4% |
| 3484555 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.55 | 42.0 | 3.73e-01 | 83.6% | 86.3% |
| 4991138 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.55 | 44.0 | 3.32e-01 | 86.4% | 49.6% |
| 3970093 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.55 | 45.0 | 3.80e-01 | 88.2% | 90.8% |
| 3955326 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.55 | 45.0 | 3.87e-01 | 90.0% | 77.2% |
| 3595184 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.55 | 43.0 | 3.32e-01 | 85.5% | 56.2% |
| 4157117 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.55 | 44.0 | 3.72e-01 | 89.1% | 69.5% |
| 4959777 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 42.0 | 3.71e-01 | 84.5% | 99.4% |
| 2568314 | 7574.1.1.5 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C | 0.55 | 44.0 | 3.79e-01 | 89.1% | 77.3% |
| 5083852 | 7576.1.1.0 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain | 0.55 | 42.0 | 4.30e-01 | 85.5% | 97.3% |
| 3737514 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.55 | 44.0 | 4.22e-01 | 90.0% | 76.2% |
| 3192036 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.55 | 44.0 | 4.09e-01 | 90.0% | 68.3% |
| 3839011 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.54 | 44.0 | 3.41e-01 | 89.1% | 52.2% |
| 4771694 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.54 | 47.0 | 4.41e-01 | 96.4% | 91.0% |
| 5052342 | 7594.1.1.1 ↗ | a/b three-layered sandwiches › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › Hydrogenase expression/formation protein HypD › HypD | 0.54 | 44.0 | 3.65e-01 | 89.1% | 49.8% |
| 4423899 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 39.0 | 3.56e-01 | 82.7% | 54.2% |
| 5001352 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.54 | 45.0 | 4.41e-01 | 97.3% | 85.0% |
| 3487184 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 42.0 | 3.76e-01 | 85.5% | 85.5% |
| 4219098 | 7574.1.1.5 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C | 0.54 | 43.0 | 3.59e-01 | 89.1% | 67.9% |
| 3475302 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 42.0 | 3.82e-01 | 85.5% | 81.9% |
| 4943180 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.54 | 44.0 | 3.43e-01 | 90.0% | 54.8% |
| None | — | 0.54 | 43.0 | 3.20e-01 | 90.0% | 42.5% | |
| 4959864 | 2007.22.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Methyl-viologen reducing hydrogenase subunit D › Methyl-viologen reducing hydrogenase subunit D › FlpD | 0.53 | 45.0 | 4.36e-01 | 95.5% | 96.8% |
| 4578566 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.53 | 43.0 | 4.36e-01 | 88.2% | 92.4% |
| 4315600 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.53 | 42.0 | 4.15e-01 | 88.2% | 80.8% |
| 1157899 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 41.0 | 3.68e-01 | 84.5% | 58.7% |
| 3279992 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 39.0 | 3.38e-01 | 77.3% | 50.9% |
| 3818658 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.53 | 43.0 | 4.09e-01 | 91.8% | 91.1% |
| 3615443 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.53 | 42.0 | 3.58e-01 | 88.2% | 75.3% |
| 4010864 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 39.0 | 3.51e-01 | 81.8% | 54.4% |
| 4462905 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.52 | 43.0 | 4.30e-01 | 93.6% | 96.5% |
| 4484526 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 38.0 | 3.45e-01 | 82.7% | 55.3% |
| 3213692 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 41.0 | 3.60e-01 | 85.5% | 85.3% |
| 4957145 | 2006.1.3.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOP6A-Spo11_Toprim | 0.52 | 44.0 | 3.78e-01 | 92.7% | 100.0% |
| 3213129 | 2006.1.3.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOP6A-Spo11_Toprim | 0.52 | 42.0 | 3.66e-01 | 88.2% | 100.0% |
| 3955594 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 37.0 | 3.31e-01 | 75.5% | 52.4% |
| 4937009 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.52 | 41.0 | 3.85e-01 | 88.2% | 86.9% |
| 3481242 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.52 | 42.0 | 4.13e-01 | 91.8% | 80.8% |
| 4771626 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.52 | 41.0 | 4.15e-01 | 87.3% | 90.0% |
| 2812996 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.52 | 37.0 | 3.68e-01 | 74.5% | 80.7% |
| 3962046 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 40.0 | 3.96e-01 | 81.8% | 82.6% |
| 3601308 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.52 | 43.0 | 3.43e-01 | 93.6% | 57.5% |
| 3787018 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.52 | 42.0 | 3.95e-01 | 90.0% | 74.1% |
| 4973340 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.51 | 41.0 | 3.59e-01 | 91.8% | 83.2% |
| 3599614 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 37.0 | 2.77e-01 | 95.5% | 29.0% |
| 3179787 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 38.0 | 3.02e-01 | 81.8% | 70.4% |
| 4093719 | 2007.1.2.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Glyco_tran_WecG | 0.51 | 37.0 | 3.35e-01 | 78.2% | 63.7% |
| 3764590 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 39.0 | 3.24e-01 | 82.7% | 47.8% |
| 4194688 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.51 | 43.0 | 4.29e-01 | 98.2% | 97.4% |
| 4605776 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.51 | 41.0 | 4.17e-01 | 94.5% | 97.3% |
| 4965658 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.51 | 40.0 | 3.33e-01 | 86.4% | 66.8% |
| 3476359 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.50 | 41.0 | 3.67e-01 | 92.7% | 61.8% |
D2
high
residues 102-258
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14491.12 best | DUF4435 | 34.5 | 2.50e-08 | 89.2% | 62.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qytA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 28.0 | 3.46e-01 | 86.6% | 69.3% |
| 4s3mB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 28.0 | 3.29e-01 | 86.6% | 66.0% |
| 5nl6A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 27.0 | 3.18e-01 | 91.7% | 70.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955333 | 3355.1.1.41 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DUF401 | 0.59 | 52.0 | 3.91e-01 | 95.5% | 76.9% |
| 4404031 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 39.0 | 3.27e-01 | 80.9% | 76.1% |