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ON506926.1__UVD42816.1__X__00001

Bact-Vir

ON506926.1__UVD42816.1__X__00001

Identity

Accession:
ON506926 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Denvervirus› Enterococcus_phage_TJE4

TaxID: 2951264

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-96
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00521.27 best DNA_topoisoIV 48.5 8.50e-13 100.0% 15.8%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bjtA05 3.90.199.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase II; domain 5 › Topoisomerase II, domain 5 0.90 84.0 5.44e-01 100.0% 28.1%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.94e-01 92.2% 98.0%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.74 66.0 5.77e-01 100.0% 95.8%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 5.92e-01 98.4% 83.1%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.45e-01 100.0% 66.3%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.34e-01 92.2% 79.4%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.68e-01 100.0% 83.3%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 5.66e-01 98.4% 80.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.45e-01 95.3% 78.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.18e-01 95.3% 76.1%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.56e-01 96.9% 88.7%
1ussA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.44e-01 100.0% 80.7%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.28e-01 95.3% 74.4%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.83e-01 96.9% 63.2%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.65 57.0 5.33e-01 96.9% 84.6%
3s64A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.64 51.0 4.73e-01 87.5% 81.5%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.95e-01 92.2% 98.1%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 45.0 3.92e-01 92.2% 47.7%
5tgtA02 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 48.0 3.98e-01 90.6% 70.7%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.60 49.0 4.99e-01 95.3% 100.0%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.60 43.0 3.96e-01 87.5% 56.2%
3d5lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 4.51e-01 90.6% 100.0%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.55e-01 92.2% 100.0%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.58 47.0 4.41e-01 95.3% 77.1%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.57 45.0 4.49e-01 95.3% 84.3%
2hzdA00 6.10.20.40 Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain 0.55 43.0 4.08e-01 90.6% 80.5%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 46.0 4.12e-01 96.9% 76.3%
3c1dB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.14e-01 93.8% 91.9%
1k3rA01 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.51 42.0 3.09e-01 95.3% 39.8%
3ehmA03 1.20.120.840 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain 0.51 37.0 3.15e-01 81.2% 66.9%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4238706 101.1.2.9 ↗ alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV 0.92 86.0 5.35e-01 100.0% 23.0%
1165372 101.1.2.9 ↗ alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV 0.92 85.0 6.44e-01 100.0% 50.7%
3594651 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.91 85.0 6.52e-01 100.0% 53.8%
3436081 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.75 65.0 6.25e-01 95.3% 89.0%
5053497 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 6.19e-01 90.6% 93.3%
1175749 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.74 66.0 5.96e-01 98.4% 93.0%
4998572 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 5.15e-01 89.1% 63.5%
5021067 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.36e-01 98.4% 60.0%
3651728 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.25e-01 98.4% 64.4%
4009179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 5.38e-01 100.0% 67.8%
4121977 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.79e-01 92.2% 100.0%
3934874 101.1.1.396 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Arg_repressor 0.70 53.0 5.59e-01 96.9% 96.4%
4928394 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.64e-01 92.2% 93.9%
3729223 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.42e-01 96.9% 93.3%
3350998 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 52.0 5.33e-01 85.9% 93.3%
3643333 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.66 54.0 4.89e-01 93.8% 71.1%
5047003 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 56.0 5.50e-01 95.3% 95.7%
4973462 101.1.2.297 ↗ alpha arrays › HTH › HTH › winged helix domain › Mrr_N 0.66 56.0 4.63e-01 95.3% 61.7%
4111834 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.65 49.0 5.00e-01 90.6% 86.7%
2429515 101.1.2.151 ↗ alpha arrays › HTH › HTH › winged helix domain › COR 0.65 56.0 5.37e-01 100.0% 86.5%
3597185 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 50.0 4.56e-01 85.9% 75.0%
3181297 101.1.2.119 ↗ alpha arrays › HTH › HTH › winged helix domain › Tau95 0.65 51.0 3.62e-01 100.0% 26.8%
3945334 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 55.0 4.84e-01 96.9% 73.7%
4945099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 4.38e-01 96.9% 55.2%
4014609 101.1.1.79 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.64 47.0 4.78e-01 89.1% 81.5%
3738343 101.1.1.79 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.64 47.0 4.82e-01 87.5% 86.7%
4426232 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.63 52.0 4.72e-01 95.3% 81.1%
1169399 101.35.1.2 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Lipoprotein_Ltp 0.62 45.0 4.81e-01 93.8% 94.2%
5045956 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.88e-01 95.3% 87.5%
5021354 101.1.2.619 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_33 0.62 47.0 4.73e-01 93.8% 84.6%
3454767 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 46.0 4.82e-01 90.6% 94.5%
3467989 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 45.0 4.64e-01 89.1% 86.7%
4258338 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.61 52.0 4.43e-01 98.4% 71.8%
3198858 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 49.0 4.85e-01 96.9% 85.7%
4440593 101.35.1.1 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.60 42.0 4.54e-01 92.2% 96.0%
4536531 101.35.1.1 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.59 42.0 4.58e-01 95.3% 96.0%
4575061 101.35.1.1 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.59 42.0 4.51e-01 95.3% 96.0%
4571183 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 46.0 4.02e-01 89.1% 89.5%
3509166 101.1.1.244 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_TIMELESS 0.58 49.0 4.81e-01 96.9% 87.1%
4468962 101.1.1.46 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_2 0.58 45.0 4.49e-01 89.1% 86.2%
3183041 7579.1.1.95 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Hydrolase_4 0.57 46.0 3.01e-01 90.6% 56.7%
3211749 108.1.1.32 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_10 0.56 44.0 4.17e-01 87.5% 70.0%
5012140 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.56 41.0 3.52e-01 82.8% 73.0%
3785665 101.1.2.599 ↗ alpha arrays › HTH › HTH › winged helix domain › ELP3_N 0.56 44.0 4.58e-01 92.2% 100.0%
3999923 108.1.1.32 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_10 0.50 41.0 2.90e-01 93.8% 67.0%