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ON526969.1__USH44569.1__SEA_CASSITA_116__00115

Bact-Vir

ON526969.1__USH44569.1__SEA_CASSITA_116__00115

Identity

Accession:
ON526969 ↗
Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.80 57.0 4.47e-01 83.8% 38.2%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.79 61.0 4.91e-01 82.4% 92.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.78 68.0 4.95e-01 95.6% 42.4%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.76 53.0 5.08e-01 73.5% 79.7%
5e1qB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.75 57.0 3.75e-01 80.9% 72.7%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.72 53.0 4.23e-01 77.9% 41.5%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.72 54.0 4.12e-01 80.9% 68.1%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.72 50.0 4.64e-01 73.5% 86.2%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.71 55.0 4.63e-01 83.8% 58.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.70 62.0 4.93e-01 100.0% 71.4%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 49.0 4.60e-01 75.0% 70.4%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 48.0 3.85e-01 83.8% 39.1%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.68 60.0 3.83e-01 100.0% 32.0%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 56.0 3.57e-01 94.1% 49.7%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.67 51.0 3.36e-01 80.9% 87.3%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.67 59.0 3.81e-01 100.0% 44.2%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.67 56.0 4.49e-01 100.0% 78.7%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.66 58.0 4.53e-01 100.0% 96.7%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 50.0 3.91e-01 83.8% 40.3%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.65 49.0 4.44e-01 94.1% 60.0%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 57.0 4.91e-01 100.0% 83.6%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.65 56.0 3.64e-01 100.0% 30.5%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.58e-01 98.5% 60.9%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.64 57.0 4.17e-01 100.0% 64.3%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.64 49.0 4.38e-01 86.8% 58.7%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.64 55.0 4.58e-01 98.5% 81.3%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 46.0 3.99e-01 79.4% 96.4%
8gzhC01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.62 54.0 4.05e-01 100.0% 63.5%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 47.0 4.64e-01 79.4% 93.0%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.62 51.0 3.80e-01 92.6% 40.1%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.62 44.0 4.79e-01 79.4% 96.3%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.62 50.0 4.27e-01 95.6% 97.6%
2ml5A00 3.10.450.410 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 41.0 3.19e-01 70.6% 38.7%
1e2rA02 2.140.10.20 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.61 51.0 3.22e-01 100.0% 39.8%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.60 53.0 3.72e-01 98.5% 89.5%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.59 49.0 3.99e-01 98.5% 74.8%
3sxxC01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.11e-01 88.2% 87.3%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.58 40.0 3.41e-01 72.1% 46.3%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 49.0 3.97e-01 100.0% 50.4%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 3.85e-01 100.0% 70.9%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.39e-01 73.5% 85.6%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 3.28e-01 97.1% 92.9%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.85e-01 97.1% 82.9%
3w9aA00 2.60.120.1160 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.25e-01 98.5% 64.6%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 45.0 4.33e-01 95.6% 95.0%
4wvmA04 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.54 45.0 3.33e-01 97.1% 89.7%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.33e-01 97.1% 91.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4046583 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.80 55.0 4.38e-01 80.9% 37.7%
4879580 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.78 56.0 4.21e-01 76.5% 33.3%
3968900 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.75 56.0 4.65e-01 79.4% 51.7%
4960076 9.16.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.74 58.0 4.85e-01 83.8% 60.0%
3975425 3844.1.1.1 a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.74 58.0 4.96e-01 85.3% 54.3%
4946504 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 53.0 5.28e-01 75.0% 94.3%
3238369 12.1.1.88 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF5386 0.74 53.0 5.88e-01 82.4% 96.2%
4108772 243.3.1.10 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.72 50.0 4.84e-01 72.1% 77.3%
1678533 243.3.1.10 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.72 52.0 5.20e-01 76.5% 92.9%
3434817 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.72 59.0 4.93e-01 92.6% 95.8%
1140350 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.72 63.0 4.86e-01 100.0% 76.1%
3979195 274.1.1.35 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.72 62.0 5.00e-01 94.1% 52.8%
3943357 274.1.1.35 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.71 58.0 5.35e-01 91.2% 69.4%
3484248 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.71 59.0 4.97e-01 94.1% 91.7%
3924939 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.71 59.0 5.03e-01 94.1% 79.1%
4033743 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.71 52.0 4.81e-01 76.5% 71.8%
3791220 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.71 59.0 4.90e-01 94.1% 74.2%
3228242 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.71 56.0 4.94e-01 86.8% 93.0%
3404297 4.1.1.326 beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.70 52.0 5.63e-01 77.9% 100.0%
4877157 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.70 53.0 3.40e-01 80.9% 17.7%
4334199 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.70 53.0 4.31e-01 80.9% 44.8%
1724304 9.1.1.30 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_like 0.70 53.0 4.65e-01 83.8% 54.4%
3583444 9.1.1.12 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.67 48.0 4.10e-01 76.5% 53.9%
4380184 9.11.1.1 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.67 49.0 4.51e-01 77.9% 78.7%
4975453 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.67 58.0 4.32e-01 95.6% 75.7%
3966051 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 55.0 4.36e-01 91.2% 45.2%
3211832 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 57.0 3.70e-01 94.1% 23.5%
3663339 331.4.1.7 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 0.66 48.0 3.70e-01 76.5% 38.1%
3199763 220.1.1.202 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.66 53.0 4.39e-01 89.7% 64.0%
3248011 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.66 56.0 3.64e-01 97.1% 44.2%
3737835 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.65 56.0 5.00e-01 97.1% 81.0%
157022 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.65 56.0 3.51e-01 100.0% 25.1%
4568749 2004.1.1.585 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23 0.65 54.0 3.49e-01 95.6% 34.6%
5014331 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.65 54.0 3.12e-01 95.6% 16.5%
3275116 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.65 56.0 3.65e-01 98.5% 56.2%
3831470 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 55.0 3.70e-01 97.1% 83.9%
3518523 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 54.0 3.60e-01 95.6% 40.7%
3815957 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.64 55.0 3.57e-01 97.1% 85.0%
4950432 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.64 56.0 4.08e-01 100.0% 66.8%
4643894 9.1.1.8 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PA_decarbox 0.64 55.0 4.14e-01 94.1% 63.7%
3214007 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.63 52.0 4.36e-01 94.1% 61.6%
4335830 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.63 56.0 3.73e-01 100.0% 77.8%
3325704 5.1.4.222 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.63 53.0 3.42e-01 98.5% 40.3%
3922884 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.63 55.0 3.45e-01 98.5% 54.4%
3970566 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.62 50.0 3.85e-01 92.6% 49.1%
1949057 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.62 45.0 3.82e-01 79.4% 86.9%
4363805 292.2.1.9 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_4 0.62 54.0 4.95e-01 100.0% 74.4%
2466103 265.1.1.2 a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Phage_coat 0.62 50.0 4.05e-01 89.7% 75.6%
3616668 5.1.4.56 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.62 51.0 3.22e-01 97.1% 40.5%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 50.0 3.98e-01 94.1% 75.3%
3421020 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 52.0 3.65e-01 95.6% 64.1%
3806989 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.60 52.0 3.48e-01 100.0% 89.5%
3832491 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 50.0 3.26e-01 95.6% 47.8%
3392728 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.59 48.0 3.93e-01 89.7% 85.6%
4681334 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.58 51.0 3.43e-01 97.1% 69.4%
3846916 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.58 46.0 3.87e-01 86.8% 52.2%
4169409 220.1.1.126 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.57 48.0 4.08e-01 94.1% 77.2%
3462336 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 45.0 3.71e-01 95.6% 45.5%
3815659 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.56 44.0 3.57e-01 91.2% 43.9%
4992208 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.55 44.0 3.03e-01 89.7% 86.4%
3928764 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.53 42.0 3.68e-01 86.8% 63.8%