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ON526973.1__USH44909.1__SEA_AMORE2_94__00093

Bact-Vir

ON526973.1__USH44909.1__SEA_AMORE2_94__00093

Identity

Accession:
ON526973 ↗
Kingdom:
phage

Quality

78.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-129
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hx8A01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.85 63.0 5.62e-01 88.6% 57.6%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.74 56.0 5.19e-01 96.6% 63.4%
5jajA03 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.74 44.0 3.95e-01 83.0% 45.7%
5jc3A02 1.20.1320.30 Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › 0.73 44.0 3.82e-01 83.0% 42.1%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.68 48.0 4.08e-01 78.4% 46.4%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.66 60.0 4.61e-01 100.0% 44.9%
4x5mA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 48.0 4.85e-01 75.0% 80.2%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.66 52.0 4.90e-01 86.4% 98.2%
6w08A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.65 55.0 3.72e-01 95.5% 55.5%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.65 47.0 4.85e-01 76.1% 83.1%
3fbzA01 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 48.0 4.58e-01 85.2% 67.6%
1t9kA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.64 46.0 3.98e-01 80.7% 47.9%
2wwxB00 1.20.1260.70 Mainly Alpha › Up-down Bundle › Ferritin › 0.63 56.0 4.30e-01 98.9% 55.0%
3on2A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 55.0 4.34e-01 100.0% 57.9%
1dn1B00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 54.0 4.11e-01 100.0% 75.7%
2cfqA02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.62 48.0 3.71e-01 85.2% 79.7%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.61 53.0 4.15e-01 96.6% 67.7%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 46.0 4.13e-01 93.2% 56.3%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 50.0 4.69e-01 90.9% 95.4%
4irnA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.60 53.0 4.81e-01 98.9% 73.9%
3vhlA02 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.60 52.0 4.74e-01 95.5% 96.7%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.60 43.0 4.23e-01 76.1% 74.2%
2xgjA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.60 50.0 3.72e-01 89.8% 69.8%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 49.0 5.03e-01 97.7% 95.3%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.58 50.0 4.05e-01 94.3% 70.7%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 44.0 4.02e-01 93.2% 60.9%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 53.0 4.19e-01 100.0% 80.6%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 49.0 4.65e-01 94.3% 89.5%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 48.0 4.16e-01 92.0% 73.5%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.57 48.0 4.28e-01 100.0% 62.8%
4dvyP03 1.20.120.1270 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III 0.57 46.0 3.73e-01 95.5% 46.3%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 50.0 4.65e-01 96.6% 88.2%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 49.0 4.68e-01 94.3% 94.1%
3nrhA00 1.20.120.1550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 0.57 50.0 4.20e-01 100.0% 89.9%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 51.0 4.30e-01 100.0% 93.3%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 49.0 4.82e-01 97.7% 90.3%
2nrjA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.56 48.0 3.28e-01 96.6% 50.3%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 48.0 4.51e-01 95.5% 88.0%
8amzT01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 50.0 3.49e-01 96.6% 34.8%
2xl4A00 1.20.120.1420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain 0.56 49.0 4.16e-01 98.9% 74.1%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.56 46.0 3.96e-01 89.8% 82.6%
1z9eA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.55 43.0 4.39e-01 95.5% 91.6%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.55 46.0 4.48e-01 93.2% 91.8%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.55 46.0 4.03e-01 87.5% 72.6%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.55 45.0 4.31e-01 89.8% 87.3%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.55 48.0 4.61e-01 96.6% 85.9%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.54 43.0 4.41e-01 90.9% 90.4%
3nfqB02 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.54 42.0 4.03e-01 95.5% 71.3%
4n5cD06 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 41.0 3.82e-01 89.8% 64.6%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.53 43.0 3.97e-01 94.3% 69.3%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.53 35.0 3.71e-01 92.0% 76.9%
4nq0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 44.0 3.26e-01 95.5% 67.3%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.53 45.0 4.26e-01 96.6% 82.6%
5jjxA01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 46.0 3.17e-01 96.6% 35.0%
2p61A00 1.20.120.490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain 0.52 46.0 4.27e-01 98.9% 95.6%
1sxjB03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.52 41.0 4.13e-01 89.8% 88.0%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 40.0 3.84e-01 87.5% 73.3%
1sxjD03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.51 41.0 4.14e-01 93.2% 91.2%
1ls1A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.50 37.0 3.78e-01 81.8% 82.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4003960 109.4.1.263 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UVSSA_N 0.84 73.0 5.90e-01 98.9% 52.3%
3616424 109.4.1.263 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UVSSA_N 0.83 72.0 5.72e-01 100.0% 48.2%
3622654 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.73 55.0 4.12e-01 78.4% 70.5%
3444085 109.4.1.1409 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_LIN_C, ARM_LIN_2nd 0.72 63.0 3.80e-01 95.5% 15.4%
3618422 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 52.0 3.13e-01 81.8% 23.5%
4474302 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.68 47.0 3.89e-01 79.5% 40.6%
3938825 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.67 47.0 4.84e-01 72.7% 84.7%
3686432 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 56.0 4.33e-01 100.0% 42.6%
3741609 109.58.1.1 alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C 0.64 50.0 4.91e-01 93.2% 80.0%
4582462 140.1.1.14 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e 0.64 45.0 3.83e-01 93.2% 44.8%
3714252 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 50.0 3.57e-01 87.5% 44.9%
4929003 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.62 45.0 4.47e-01 76.1% 77.8%
2430288 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.61 48.0 4.11e-01 86.4% 51.7%
4548049 3651.1.1.1 alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B 0.61 48.0 4.27e-01 86.4% 58.5%
4220256 186.1.1.1 alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 0.61 48.0 4.49e-01 93.2% 69.1%
3270521 109.4.1.139 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Hyccin 0.61 52.0 3.61e-01 100.0% 65.4%
3240501 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.60 51.0 4.40e-01 93.2% 70.0%
3276672 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.60 54.0 4.72e-01 100.0% 93.1%
3543903 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 51.0 4.71e-01 94.3% 87.3%
4968762 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.59 50.0 4.58e-01 93.2% 80.9%
3282593 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.59 52.0 3.77e-01 96.6% 49.2%
3800506 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.59 50.0 4.56e-01 93.2% 84.3%
3230066 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.58 50.0 4.30e-01 94.3% 95.0%
3918068 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 50.0 4.55e-01 93.2% 83.5%
3749998 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 50.0 4.49e-01 94.3% 80.0%
3757568 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 46.0 4.39e-01 86.4% 89.5%
3794988 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.58 50.0 4.48e-01 96.6% 77.6%
5005528 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.57 49.0 4.73e-01 94.3% 92.0%
4586684 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 49.0 4.28e-01 93.2% 74.6%
3220229 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 49.0 4.40e-01 93.2% 79.2%
4517375 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 4.50e-01 93.2% 88.2%
3751496 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 3.63e-01 93.2% 43.7%
3923407 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 4.49e-01 94.3% 89.1%
3564106 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 47.0 4.48e-01 92.0% 92.4%
3917090 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 4.22e-01 94.3% 71.1%
3778716 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 48.0 4.55e-01 93.2% 89.5%
3413717 603.1.1.17 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.56 49.0 3.65e-01 100.0% 67.8%
3275186 109.4.1.1513 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_17 0.56 46.0 3.78e-01 95.5% 48.2%
3474685 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 48.0 4.42e-01 95.5% 85.2%
3375388 604.6.1.2 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.56 49.0 4.33e-01 100.0% 80.7%
3583440 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 48.0 4.34e-01 95.5% 80.8%
3224632 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 48.0 4.54e-01 94.3% 88.6%
4018342 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.56 47.0 4.40e-01 94.3% 82.7%
3938350 604.1.1.67 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_5 0.56 48.0 4.54e-01 95.5% 92.4%
3833042 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.56 49.0 3.95e-01 97.7% 57.1%
3894879 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 46.0 4.40e-01 92.0% 88.6%
3521044 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 47.0 4.39e-01 94.3% 89.1%
3489722 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 46.0 4.34e-01 92.0% 93.3%
3940780 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 47.0 4.57e-01 96.6% 94.0%
3750020 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 46.0 4.38e-01 94.3% 92.4%
3755118 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 45.0 4.18e-01 92.0% 87.0%
3513988 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 46.0 4.23e-01 95.5% 80.8%
3489720 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 42.0 3.97e-01 84.1% 80.0%
3599875 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.55 38.0 3.26e-01 84.1% 45.0%
3503767 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.55 47.0 4.08e-01 96.6% 65.7%
3177558 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.55 46.0 4.32e-01 90.9% 75.2%
3291651 532.1.1.1 alpha arrays › Type III secretion system domain-like › Antibiotic binding domain of TipA-like multidrug resistance regulators › Antibiotic binding domain of TipA-like multidrug resistance regulators › TipAS 0.54 46.0 4.34e-01 100.0% 88.7%
3992691 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.54 42.0 3.95e-01 81.8% 80.0%
3577228 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 43.0 3.93e-01 85.2% 73.9%
3898383 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 47.0 4.20e-01 96.6% 79.2%
3319122 604.6.1.2 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.54 47.0 4.01e-01 100.0% 68.7%
3449262 604.6.1.2 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.53 46.0 3.88e-01 100.0% 68.8%
3469833 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.53 46.0 4.14e-01 95.5% 80.8%
3841680 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.53 44.0 3.90e-01 92.0% 76.9%
3597139 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.53 45.0 3.82e-01 96.6% 55.5%
4013154 601.16.1.18 alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › VBS_C3G9 0.53 47.0 4.08e-01 97.7% 77.8%
3628428 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.53 41.0 3.07e-01 85.2% 72.9%
3559718 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.53 44.0 4.12e-01 94.3% 89.1%
3172167 604.6.1.2 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.53 46.0 3.90e-01 100.0% 65.8%
3585899 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.52 45.0 4.21e-01 96.6% 88.2%
3758959 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 43.0 2.98e-01 93.2% 28.9%
3796046 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.52 44.0 4.05e-01 95.5% 85.2%
4004338 3352.1.1.40 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PF27133 0.51 42.0 2.85e-01 94.3% 81.1%
3758972 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.51 42.0 3.94e-01 92.0% 88.2%
3920747 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 42.0 3.26e-01 94.3% 47.3%
D2 high residues 242-314
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 4.64e-01 100.0% 39.7%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.43e-01 100.0% 70.3%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 55.0 5.78e-01 100.0% 92.4%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.45e-01 100.0% 76.8%
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.70 55.0 5.09e-01 100.0% 66.7%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.85e-01 100.0% 88.7%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 60.0 5.05e-01 100.0% 75.6%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.99e-01 100.0% 57.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.33e-01 100.0% 84.0%
1qasA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 45.0 4.28e-01 91.8% 67.0%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.58 50.0 4.36e-01 100.0% 95.7%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.26e-01 100.0% 69.8%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 47.0 4.60e-01 98.6% 92.5%
1e7uA04 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.53 39.0 3.10e-01 79.5% 61.4%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 33.0 3.56e-01 74.0% 78.9%
3ewkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 42.0 3.82e-01 93.2% 93.2%
2lu2A00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 33.0 3.26e-01 83.6% 59.3%
2wiyA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 39.0 2.58e-01 89.0% 71.3%
1sglA00 3.90.730.10 Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like 0.51 40.0 3.06e-01 93.2% 91.3%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 40.0 2.87e-01 90.4% 46.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5029366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 58.0 5.55e-01 100.0% 69.4%
4950213 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 61.0 5.52e-01 100.0% 63.0%
3592184 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 53.0 3.96e-01 100.0% 32.6%
5030817 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.70 58.0 4.78e-01 100.0% 50.8%
3742091 101.1.2.493 alpha arrays › HTH › HTH › winged helix domain › PF26557 0.70 58.0 5.31e-01 100.0% 69.5%
3923802 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.69 53.0 4.87e-01 100.0% 64.2%
3389142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 60.0 5.74e-01 100.0% 83.5%
3687829 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.00e-01 100.0% 68.9%
3721862 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 4.89e-01 100.0% 63.0%
235960 101.1.2.229 alpha arrays › HTH › HTH › winged helix domain › SIR3_C 0.68 60.0 5.05e-01 100.0% 75.6%
3685473 109.4.1.295 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt 0.68 54.0 3.28e-01 100.0% 13.3%
3732236 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 3.66e-01 100.0% 24.8%
5046509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 5.10e-01 100.0% 78.7%
5054103 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 5.51e-01 100.0% 90.0%
3601302 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 4.20e-01 100.0% 42.0%
3707837 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 49.0 4.55e-01 100.0% 61.1%
5046136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 60.0 4.84e-01 100.0% 53.6%
3227321 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.67 56.0 4.87e-01 100.0% 60.9%
4012917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 5.27e-01 100.0% 73.7%
3702221 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.32e-01 100.0% 86.7%
1040605 101.1.2.77 alpha arrays › HTH › HTH › winged helix domain › ESCRT-II 0.66 56.0 5.60e-01 100.0% 93.2%
3214912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.24e-01 100.0% 71.0%
None 0.66 53.0 4.60e-01 100.0% 56.5%
3246949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.66e-01 100.0% 90.0%
3251947 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.66 52.0 4.75e-01 100.0% 65.3%
3405906 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 5.55e-01 100.0% 90.0%
3938693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 4.62e-01 100.0% 50.0%
3719038 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 3.76e-01 100.0% 31.5%
4073416 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.65 53.0 4.43e-01 100.0% 52.0%
4947062 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.86e-01 100.0% 69.5%
4012882 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 57.0 5.17e-01 100.0% 75.0%
4955353 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 57.0 4.89e-01 100.0% 66.1%
4015092 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 47.0 4.85e-01 100.0% 85.7%
3222445 148.1.3.41 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C 0.63 47.0 4.81e-01 100.0% 85.5%
3518101 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.63 54.0 4.90e-01 100.0% 70.0%
3519165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 5.18e-01 100.0% 83.5%
4972118 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.63 56.0 3.54e-01 100.0% 94.9%
3439148 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.63 55.0 4.19e-01 100.0% 41.1%
3743915 101.1.2.73 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.63 56.0 4.84e-01 100.0% 72.2%
3947968 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.62 53.0 4.59e-01 100.0% 61.7%
3661546 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.62 52.0 4.42e-01 100.0% 56.0%
3539518 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.59e-01 100.0% 67.0%
3443063 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.62 54.0 4.10e-01 100.0% 44.4%
4942158 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.62 47.0 4.92e-01 98.6% 93.8%
3382916 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.62 51.0 3.18e-01 98.6% 66.9%
3988603 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.61 47.0 4.56e-01 100.0% 72.9%
3168448 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.61 52.0 4.40e-01 100.0% 55.8%
4950303 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.61 53.0 4.75e-01 100.0% 82.9%
3728829 101.1.2.359 alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.61 50.0 4.49e-01 100.0% 63.6%
3314406 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.60 52.0 4.44e-01 100.0% 60.8%
3729359 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 52.0 4.93e-01 100.0% 87.8%
3792911 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.60 53.0 4.57e-01 100.0% 66.1%
3710687 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.59 41.0 4.12e-01 100.0% 72.0%
3943865 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.31e-01 100.0% 59.2%
4113345 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.59 44.0 2.81e-01 84.9% 65.9%
3376263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.80e-01 100.0% 83.5%
3934486 108.1.1.20 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_like 0.58 45.0 4.27e-01 89.0% 68.9%
3813507 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.57 50.0 4.18e-01 100.0% 56.2%
1293857 108.1.1.4 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 43.0 4.34e-01 93.2% 80.8%
3284487 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.57 42.0 2.67e-01 82.2% 67.9%
3298593 109.4.1.43 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP 0.56 49.0 3.36e-01 100.0% 27.4%
3974489 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.02e-01 100.0% 54.1%
4969538 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.53 40.0 3.21e-01 83.6% 90.3%
3198 108.1.1.22 alpha arrays › EF-hand › EF-hand-related › EF-hand › IBP39 0.51 37.0 3.32e-01 93.2% 54.3%