←Back to structures

ON526981.1__USH45571.1__SEA_PHABULOSO_76__00076

Bact-Vir

ON526981.1__USH45571.1__SEA_PHABULOSO_76__00076

Identity

Accession:
ON526981 ↗
Kingdom:
phage

Quality

83.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Getalongvirus› Gordonia_phage_Phabuloso

TaxID: 2927265

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-52
PDB
Domain cluster: rep: MN234184.1__QFG10075.1__SEA_IDENTITYCRISIS_56__00055__D28-71
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 3.17e-01 75.6% 84.0%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.59 41.0 2.57e-01 75.6% 19.9%
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.58 39.0 2.92e-01 73.3% 85.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 41.0 3.33e-01 80.0% 71.7%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 39.0 2.90e-01 75.6% 61.0%
2kcqA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 44.0 3.16e-01 91.1% 90.8%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.56 36.0 2.79e-01 80.0% 26.1%
1pyiA01 4.10.240.10 Few Secondary Structures › Irregular › CD2-Gal4 › Zn(2)-C6 fungal-type DNA-binding domain 0.56 36.0 3.31e-01 84.4% 48.4%
3vsvA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 34.0 2.53e-01 77.8% 20.3%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 42.0 2.61e-01 100.0% 96.4%
4f4oC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 37.0 2.68e-01 80.0% 88.3%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.51 38.0 2.86e-01 84.4% 100.0%
5unhA02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 32.0 2.06e-01 95.6% 9.8%
5teaB00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.51 38.0 2.79e-01 97.8% 93.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3518515 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.62 43.0 2.44e-01 75.6% 12.0%
3600992 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 40.0 2.92e-01 91.1% 64.9%
3203359 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 33.0 3.42e-01 71.1% 66.7%
3579075 380.1.1.13 ↗ few secondary structure elements › Kringle-like › Kringle-like › Kringle-like › PF25866 0.52 40.0 3.33e-01 93.3% 89.4%
3992139 275.1.1.1 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.51 35.0 2.95e-01 71.1% 62.5%
4192665 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 34.0 2.65e-01 71.1% 30.0%
3596561 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.50 35.0 3.15e-01 84.4% 48.6%