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ON528725.1__URY11388.1__X__00237
Bact-VirON528725.1__URY11388.1__X__00237
Identity
- Accession:
- ON528725 ↗
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Mosigvirus›
Shigella_phage_ESh15
TaxID: 2950760
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-97
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 43.0 | 4.95e-01 | 100.0% | 100.0% |
| 1irxA02 | 2.30.30.300 | Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like | 0.65 | 35.0 | 4.37e-01 | 96.3% | 97.7% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.64 | 49.0 | 4.95e-01 | 100.0% | 83.7% |
| 4z24A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 53.0 | 3.52e-01 | 96.3% | 85.8% |
| 4c3xA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 54.0 | 3.49e-01 | 95.1% | 88.4% |
| 4udqA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 53.0 | 3.49e-01 | 96.3% | 90.7% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 53.0 | 3.85e-01 | 96.3% | 82.6% |
| 5bulA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 52.0 | 3.38e-01 | 97.5% | 71.9% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 53.0 | 4.71e-01 | 100.0% | 96.7% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.60 | 46.0 | 4.08e-01 | 85.2% | 67.7% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 45.0 | 4.84e-01 | 100.0% | 98.5% |
| 3e1tA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 51.0 | 3.69e-01 | 97.5% | 51.4% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.60 | 49.0 | 4.08e-01 | 93.8% | 63.2% |
| 3ayjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 50.0 | 3.26e-01 | 95.1% | 73.6% |
| 1h6vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 51.0 | 3.71e-01 | 96.3% | 83.2% |
| 3ab1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 51.0 | 4.47e-01 | 98.8% | 96.0% |
| 5ygqA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 50.0 | 4.48e-01 | 98.8% | 97.5% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 50.0 | 3.72e-01 | 97.5% | 82.0% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.55 | 40.0 | 4.29e-01 | 100.0% | 94.1% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 46.0 | 3.61e-01 | 95.1% | 77.0% |
| 5v6fA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.55 | 47.0 | 4.05e-01 | 100.0% | 96.4% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 46.0 | 3.35e-01 | 96.3% | 94.3% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.36e-01 | 84.0% | 74.7% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 4.15e-01 | 86.4% | 90.9% |
| 2knqA01 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.53 | 37.0 | 3.26e-01 | 75.3% | 90.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.52 | 33.0 | 3.36e-01 | 96.3% | 65.0% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.68e-01 | 92.6% | 82.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3701345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 52.0 | 5.29e-01 | 100.0% | 86.3% |
| 4995669 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 52.0 | 5.44e-01 | 100.0% | 94.7% |
| 3482680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.95e-01 | 100.0% | 92.3% |
| 3278414 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 52.0 | 3.31e-01 | 95.1% | 91.7% |
| 3396594 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.47e-01 | 100.0% | 88.3% |
| 3503332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 4.88e-01 | 98.8% | 98.5% |
| 4185190 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.62 | 32.0 | 3.97e-01 | 95.1% | 86.7% |
| 4440924 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.62 | 51.0 | 3.34e-01 | 93.8% | 90.6% |
| 5053669 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.62 | 52.0 | 3.29e-01 | 96.3% | 63.1% |
| 3400765 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.61 | 52.0 | 3.58e-01 | 95.1% | 79.3% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.61 | 46.0 | 4.94e-01 | 100.0% | 97.1% |
| None | — | 0.61 | 51.0 | 3.47e-01 | 95.1% | 84.7% | |
| 5000055 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.61 | 53.0 | 3.43e-01 | 97.5% | 73.6% |
| None | — | 0.61 | 52.0 | 3.19e-01 | 95.1% | 56.9% | |
| 5049418 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.60 | 52.0 | 3.68e-01 | 97.5% | 66.2% |
| 3278795 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.60 | 51.0 | 3.26e-01 | 96.3% | 68.0% |
| None | — | 0.59 | 50.0 | 3.28e-01 | 96.3% | 51.7% | |
| 3643800 | 813.1.1.1 ↗ | a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase › Chalcone | 0.57 | 49.0 | 3.69e-01 | 100.0% | 73.2% |
| 3982705 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.56 | 44.0 | 4.23e-01 | 86.4% | 85.1% |
| 4007854 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.56 | 44.0 | 4.38e-01 | 86.4% | 90.6% |
| 2740077 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.55 | 42.0 | 4.07e-01 | 86.4% | 82.5% |
| 4580919 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.54 | 42.0 | 4.24e-01 | 85.2% | 95.0% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.54 | 42.0 | 4.14e-01 | 86.4% | 88.9% |
| 3226497 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.54 | 37.0 | 3.31e-01 | 97.5% | 50.4% |
| 3406489 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.54 | 40.0 | 3.37e-01 | 84.0% | 45.5% |
| 3931969 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.57e-01 | 82.7% | 93.6% |
| 3791305 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 39.0 | 2.95e-01 | 84.0% | 32.2% |
| 3372534 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.52 | 40.0 | 3.33e-01 | 86.4% | 60.0% |
| 1512998 | 3953.1.1.1 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N | 0.52 | 40.0 | 4.04e-01 | 86.4% | 89.4% |
| 3299665 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.50 | 37.0 | 2.64e-01 | 79.0% | 72.0% |
| 3505140 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.50 | 38.0 | 3.12e-01 | 84.0% | 41.9% |