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ON529533.1__UXY92334.1__X__00088

Bact-Vir

ON529533.1__UXY92334.1__X__00088

Identity

Accession:
ON529533 ↗
Kingdom:
phage

Quality

79.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-90
PDB
Domain cluster: representative
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.71 52.0 5.08e-01 100.0% 69.3%
7dg2C01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.70 53.0 5.77e-01 100.0% 96.0%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 44.0 4.49e-01 71.1% 66.7%
6lbsB01 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.67 52.0 5.54e-01 100.0% 96.2%
1wj5A01 1.10.10.980 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain 0.65 58.0 5.69e-01 100.0% 94.9%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 4.91e-01 100.0% 98.5%
6zxbA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 40.0 3.41e-01 71.1% 39.6%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.62 33.0 3.23e-01 73.3% 44.0%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.48e-01 100.0% 77.0%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 5.24e-01 100.0% 98.8%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 5.25e-01 98.9% 97.6%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.76e-01 100.0% 100.0%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.57e-01 100.0% 85.7%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.78e-01 97.8% 100.0%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.37e-01 100.0% 75.9%
5llwA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.61 38.0 3.38e-01 71.1% 41.6%
7e6gA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.61 39.0 3.34e-01 71.1% 38.9%
3u1kB04 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.61 35.0 3.80e-01 74.4% 69.4%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.61 40.0 4.23e-01 100.0% 77.2%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 37.0 3.83e-01 83.3% 63.6%
2xrhA00 1.20.120.1430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle 0.60 46.0 4.47e-01 93.3% 73.0%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.99e-01 100.0% 97.5%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.94e-01 97.8% 100.0%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 4.21e-01 98.9% 77.4%
3hvwA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.59 38.0 3.21e-01 72.2% 37.1%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.59 39.0 4.09e-01 97.8% 77.9%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 4.05e-01 94.4% 72.4%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.32e-01 97.8% 81.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 38.0 3.56e-01 94.4% 52.1%
4ne4A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 44.0 3.59e-01 86.7% 43.7%
3cuqC01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.57 47.0 4.62e-01 100.0% 83.7%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 4.14e-01 100.0% 81.2%
4obuA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.56 43.0 3.18e-01 82.2% 53.4%
2qmaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 37.0 3.30e-01 92.2% 48.0%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 3.52e-01 94.4% 57.7%
3f6tA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 44.0 3.78e-01 88.9% 52.7%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 40.0 3.25e-01 100.0% 38.9%
2lycA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.55 48.0 4.34e-01 100.0% 80.8%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.55 38.0 4.01e-01 96.7% 79.3%
6ofsA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.55 42.0 3.23e-01 83.3% 66.2%
5o5cB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 39.0 3.48e-01 74.4% 57.8%
5xgbA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 42.0 3.35e-01 82.2% 68.7%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 3.11e-01 92.2% 35.7%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 4.09e-01 100.0% 93.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.59e-01 94.4% 63.4%
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.54 43.0 4.26e-01 100.0% 81.2%
3tvkA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 41.0 3.33e-01 82.2% 70.9%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.53 37.0 4.01e-01 91.1% 90.1%
6eibD00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 37.0 3.11e-01 78.9% 41.0%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.68e-01 100.0% 70.8%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 37.0 3.73e-01 97.8% 72.8%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.75e-01 98.9% 70.3%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.52 43.0 4.19e-01 91.1% 82.4%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.50 43.0 4.05e-01 91.1% 87.7%
2zf9A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 37.0 2.98e-01 100.0% 38.6%
6hbzA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.50 39.0 3.32e-01 86.7% 79.9%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.50 40.0 2.89e-01 93.3% 29.3%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3377114 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.75 49.0 4.84e-01 93.3% 63.2%
5054494 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.74 50.0 5.45e-01 93.3% 85.3%
5074997 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.68 45.0 4.81e-01 96.7% 80.0%
4979496 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.67 43.0 4.87e-01 95.6% 90.8%
4933974 328.9.1.0 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.66 42.0 4.71e-01 93.3% 87.7%
5076691 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.66 43.0 4.67e-01 96.7% 81.3%
5011278 304.48.1.22 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.65 40.0 3.76e-01 71.1% 50.5%
3519165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 5.07e-01 97.8% 85.9%
4518792 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.63 43.0 4.06e-01 71.1% 71.8%
3402809 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.62 47.0 4.83e-01 100.0% 85.9%
3617310 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.62 34.0 3.73e-01 71.1% 64.0%
5062113 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.62 41.0 4.31e-01 96.7% 74.7%
5028329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 46.0 4.95e-01 97.8% 96.0%
5048091 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.62 52.0 3.34e-01 92.2% 54.4%
3883014 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.61 45.0 4.70e-01 97.8% 86.3%
3265860 101.1.2.74 alpha arrays › HTH › HTH › winged helix domain › Cnd2 0.61 54.0 5.22e-01 100.0% 94.2%
3250039 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.50e-01 100.0% 62.2%
5046869 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.61 43.0 4.50e-01 96.7% 82.5%
5023065 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.61 38.0 3.92e-01 72.2% 65.9%
4234725 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.61 40.0 4.00e-01 72.2% 64.2%
4476643 304.48.1.14 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF 0.61 38.0 3.26e-01 71.1% 38.0%
4070229 304.48.1.22 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.60 40.0 3.77e-01 71.1% 55.5%
4990919 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.70e-01 100.0% 79.0%
4994982 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.60 40.0 4.32e-01 97.8% 84.0%
5075512 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.60 39.0 3.08e-01 71.1% 31.2%
3922669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.45e-01 100.0% 73.3%
4976723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 42.0 4.59e-01 100.0% 97.1%
4602413 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.59 52.0 3.24e-01 100.0% 66.4%
3483771 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.58 45.0 4.51e-01 93.3% 78.9%
5048525 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 44.0 4.53e-01 100.0% 85.9%
4145731 304.48.1.22 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.58 38.0 3.57e-01 71.1% 53.6%
4482531 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.58 38.0 3.97e-01 97.8% 72.9%
4944833 304.48.1.31 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cas10-Cmr2_palm2 0.57 40.0 3.13e-01 74.4% 36.1%
5001357 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 4.47e-01 100.0% 82.0%
3694234 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.56 46.0 3.80e-01 100.0% 48.8%
2506903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.10e-01 95.6% 69.7%
5046509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 4.19e-01 100.0% 93.3%
3455220 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.54 33.0 3.34e-01 84.4% 58.9%
4325095 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.54 47.0 3.62e-01 100.0% 61.9%
3973648 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.54 46.0 3.46e-01 97.8% 50.8%
3656805 109.4.1.514 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps54 0.53 45.0 3.24e-01 98.9% 41.6%
3725516 10.12.1.12 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.53 45.0 3.01e-01 94.4% 40.5%
3291138 7523.1.1.17 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › OpuAC 0.53 39.0 3.20e-01 92.2% 40.6%
3941592 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 44.0 4.16e-01 91.1% 92.7%
3966559 304.48.1.14 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF 0.53 41.0 3.35e-01 82.2% 73.9%
3981523 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.53 45.0 3.18e-01 92.2% 38.5%
4011754 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.53 41.0 4.11e-01 98.9% 80.0%
4010106 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.52 45.0 4.18e-01 92.2% 92.7%
5045649 223.1.1.51 a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 0.51 43.0 3.23e-01 92.2% 84.4%
3742303 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.51 45.0 3.56e-01 100.0% 93.3%
3587822 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.51 42.0 3.78e-01 92.2% 90.8%
5066673 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.51 42.0 3.51e-01 93.3% 50.9%
4538536 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.50 43.0 3.01e-01 92.2% 38.5%