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ON529850.1__UTC28074.1__GURKE_00420__00041
Bact-VirON529850.1__UTC28074.1__GURKE_00420__00041
Identity
- Accession:
- ON529850 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Kikimoravirus›
Brevundimonas_phage_vB_BpoS-Gurke
TaxID: 2948599
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-118
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.87 | 81.0 | 6.03e-01 | 100.0% | 44.6% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 51.0 | 3.84e-01 | 83.1% | 40.4% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 33.0 | 3.45e-01 | 80.0% | 53.3% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 44.0 | 3.46e-01 | 75.4% | 41.3% |
| 3akhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 42.0 | 2.68e-01 | 73.8% | 31.6% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.59 | 41.0 | 3.51e-01 | 72.3% | 91.6% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 45.0 | 4.07e-01 | 84.6% | 59.1% |
| 1f2uA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 3.90e-01 | 98.5% | 84.6% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 48.0 | 4.06e-01 | 100.0% | 94.4% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 35.0 | 3.49e-01 | 73.8% | 56.3% |
| 1vqzA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.57 | 39.0 | 3.58e-01 | 72.3% | 89.8% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.56 | 37.0 | 3.44e-01 | 70.8% | 88.8% |
| 7jiuA03 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.55 | 42.0 | 3.29e-01 | 81.5% | 50.7% |
| 2v5oA05 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.55 | 41.0 | 3.21e-01 | 81.5% | 42.9% |
| 8p2bA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.55 | 38.0 | 3.59e-01 | 73.8% | 61.3% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 44.0 | 2.92e-01 | 92.3% | 67.6% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 39.0 | 3.54e-01 | 78.5% | 93.5% |
| 1bdgA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 3.03e-01 | 80.0% | 65.9% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 3.87e-01 | 92.3% | 62.6% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 39.0 | 3.11e-01 | 76.9% | 86.4% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.50e-01 | 98.5% | 46.7% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.54 | 42.0 | 4.25e-01 | 100.0% | 87.3% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 46.0 | 4.10e-01 | 100.0% | 89.8% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 2.99e-01 | 78.5% | 37.5% |
| 3nqhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 2.91e-01 | 100.0% | 46.5% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.52 | 40.0 | 3.72e-01 | 89.2% | 65.1% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.52 | 40.0 | 2.98e-01 | 100.0% | 30.9% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.51 | 39.0 | 3.15e-01 | 86.2% | 94.4% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.51 | 45.0 | 4.32e-01 | 100.0% | 85.3% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 34.0 | 2.93e-01 | 81.5% | 41.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027383 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.66 | 49.0 | 3.07e-01 | 81.5% | 54.7% |
| 3964987 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.65 | 45.0 | 3.51e-01 | 70.8% | 86.9% |
| 3238384 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.63 | 54.0 | 3.87e-01 | 98.5% | 89.7% |
| 4679171 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.62 | 42.0 | 3.46e-01 | 70.8% | 92.2% |
| 4397552 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.62 | 43.0 | 3.42e-01 | 72.3% | 90.4% |
| 3308121 | 11.1.1.578 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MATH_2 | 0.61 | 41.0 | 4.00e-01 | 70.8% | 68.0% |
| 5001584 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.61 | 44.0 | 4.01e-01 | 75.4% | 67.1% |
| 3290541 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.60 | 39.0 | 3.94e-01 | 87.7% | 66.2% |
| 1558719 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.60 | 45.0 | 3.91e-01 | 83.1% | 56.2% |
| 5003854 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.59 | 40.0 | 3.34e-01 | 70.8% | 94.8% |
| 4039156 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.59 | 41.0 | 3.40e-01 | 72.3% | 93.6% |
| 3261978 | 244.3.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C | 0.58 | 39.0 | 3.94e-01 | 75.4% | 69.2% |
| 3732081 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.58 | 45.0 | 3.88e-01 | 86.2% | 80.0% |
| 3168452 | 331.10.2.3 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 | 0.57 | 51.0 | 4.36e-01 | 100.0% | 82.9% |
| 3284941 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 46.0 | 3.90e-01 | 100.0% | 54.3% |
| 6736 | 244.3.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C | 0.57 | 39.0 | 3.58e-01 | 72.3% | 89.8% |
| 2418839 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.57 | 43.0 | 3.58e-01 | 83.1% | 63.9% |
| 3451905 | 5015.1.1.0 ↗ | extended segments › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex › PetM subunit of the cytochrome b6f complex | 0.56 | 39.0 | 4.25e-01 | 87.7% | 94.0% |
| 4382988 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.56 | 43.0 | 3.47e-01 | 98.5% | 44.2% |
| 3355345 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 41.0 | 4.04e-01 | 92.3% | 72.9% |
| 2141304 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.55 | 37.0 | 2.92e-01 | 70.8% | 83.2% |
| 3880624 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 47.0 | 4.40e-01 | 96.9% | 97.5% |
| 5071083 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.55 | 48.0 | 3.16e-01 | 96.9% | 41.5% |
| 3204139 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.54 | 47.0 | 3.25e-01 | 96.9% | 36.0% |
| 4666231 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.54 | 44.0 | 3.35e-01 | 95.4% | 66.3% |
| 3989194 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.54 | 43.0 | 3.46e-01 | 96.9% | 44.8% |
| 4030091 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.54 | 47.0 | 3.35e-01 | 100.0% | 38.0% |
| 4259228 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 41.0 | 3.50e-01 | 98.5% | 50.0% |
| 4659536 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 43.0 | 3.44e-01 | 98.5% | 44.8% |
| 3589882 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.53 | 38.0 | 4.29e-01 | 95.4% | 98.0% |
| 4144742 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 44.0 | 3.55e-01 | 98.5% | 48.3% |
| 4067862 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 43.0 | 3.54e-01 | 98.5% | 49.6% |
| 4200618 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 43.0 | 3.56e-01 | 98.5% | 50.4% |
| 4954572 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 43.0 | 3.47e-01 | 96.9% | 47.5% |
| 4369846 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.53 | 44.0 | 3.52e-01 | 96.9% | 48.3% |
| 4037664 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 45.0 | 3.61e-01 | 98.5% | 48.8% |
| 3928311 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 41.0 | 2.57e-01 | 83.1% | 23.3% |
| 4606103 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 42.0 | 3.41e-01 | 98.5% | 46.7% |
| 4098000 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 43.0 | 3.49e-01 | 96.9% | 48.3% |
| 4628536 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 42.0 | 3.49e-01 | 98.5% | 49.6% |
| 4442902 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 44.0 | 3.53e-01 | 98.5% | 48.0% |
| 5046724 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 43.0 | 3.52e-01 | 98.5% | 50.4% |
| 4115185 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.52 | 43.0 | 3.38e-01 | 98.5% | 44.6% |
| 4294687 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.51 | 41.0 | 3.43e-01 | 98.5% | 49.6% |
| 4010765 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.51 | 44.0 | 3.50e-01 | 98.5% | 48.8% |
| 4600693 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.51 | 42.0 | 3.37e-01 | 98.5% | 46.4% |
| 3275715 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 35.0 | 3.09e-01 | 72.3% | 82.0% |
| 4218926 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.50 | 42.0 | 3.40e-01 | 98.5% | 49.2% |
| 4564098 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.50 | 40.0 | 3.24e-01 | 96.9% | 46.7% |
| 5052265 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.50 | 42.0 | 3.37e-01 | 96.9% | 48.0% |