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ON529850.1__UTC28496.1__GURKE_04940__00463

Bact-Vir

ON529850.1__UTC28496.1__GURKE_04940__00463

Identity

Accession:
ON529850 ↗
Kingdom:
phage

Quality

74.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Kikimoravirus› Brevundimonas_phage_vB_BpoS-Gurke

TaxID: 2948599

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-79
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.67 44.0 3.95e-01 88.2% 49.0%
2pdoA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 58.0 4.93e-01 98.7% 81.5%
1y7rA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 55.0 4.64e-01 98.7% 72.7%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 44.0 4.02e-01 88.2% 55.6%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 41.0 3.78e-01 82.9% 54.7%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 43.0 3.95e-01 88.2% 55.3%
5ib0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 52.0 4.35e-01 98.7% 73.7%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.60 49.0 3.13e-01 89.5% 63.8%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 50.0 4.19e-01 94.7% 74.1%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.60 51.0 3.96e-01 97.4% 88.4%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.60 46.0 4.37e-01 85.5% 70.8%
4bg8A01 3.30.420.430 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.59 40.0 3.41e-01 71.1% 93.0%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.58 47.0 4.25e-01 94.7% 63.9%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 47.0 3.77e-01 90.8% 88.1%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 44.0 3.72e-01 81.6% 91.4%
1milA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 44.0 3.93e-01 81.6% 70.2%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 2.99e-01 94.7% 38.5%
1kczA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 39.0 3.08e-01 72.4% 85.9%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 44.0 3.49e-01 88.2% 83.8%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 45.0 4.22e-01 100.0% 69.7%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 43.0 3.43e-01 84.2% 88.4%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.55 47.0 4.74e-01 96.1% 98.7%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 28.0 3.19e-01 82.9% 63.2%
4an6B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 37.0 2.95e-01 72.4% 60.2%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 3.00e-01 97.4% 88.0%
4adiA02 3.30.67.20 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Rubella membrane glycoprotein E1, domain 2 0.54 37.0 3.58e-01 72.4% 97.7%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 36.0 3.93e-01 90.8% 96.4%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 45.0 3.72e-01 97.4% 85.7%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 38.0 3.46e-01 80.3% 83.6%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 36.0 3.98e-01 76.3% 94.8%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.24e-01 85.5% 79.7%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.51 38.0 3.58e-01 89.5% 63.8%
4gyiA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 39.0 3.63e-01 82.9% 90.8%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.51 38.0 4.22e-01 90.8% 100.0%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.54e-01 98.7% 78.8%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030033 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.66 49.0 5.01e-01 88.2% 81.3%
4965392 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.64 36.0 4.31e-01 89.5% 84.0%
3575298 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.63 46.0 4.12e-01 81.6% 53.6%
3514017 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.60 41.0 3.55e-01 90.8% 46.1%
4875038 9.1.1.11 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.60 48.0 3.85e-01 88.2% 94.7%
3597599 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.59 45.0 4.16e-01 88.2% 62.0%
3747656 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 48.0 3.95e-01 93.4% 92.0%
3629488 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.58 44.0 3.82e-01 88.2% 52.2%
4371937 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.58 50.0 3.31e-01 97.4% 30.7%
5018514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 50.0 4.19e-01 100.0% 86.7%
3699899 214.1.1.6 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.57 43.0 3.74e-01 88.2% 51.7%
4445317 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 43.0 3.48e-01 82.9% 84.5%
3851797 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 44.0 3.53e-01 88.2% 83.6%
3906040 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 44.0 3.51e-01 88.2% 83.5%
3777334 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 43.0 3.46e-01 84.2% 84.9%
4946589 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.56 40.0 3.10e-01 76.3% 87.2%
3876831 389.1.2.8 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › PF28847 0.56 40.0 4.08e-01 77.6% 77.3%
3348604 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 41.0 3.17e-01 77.6% 65.6%
5072644 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.54 39.0 3.31e-01 100.0% 45.4%
3324925 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.54 36.0 3.85e-01 76.3% 80.0%
2537367 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 46.0 3.51e-01 97.4% 85.3%
3968690 3784.1.1.0 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.53 44.0 3.55e-01 92.1% 88.0%
3327179 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.53 35.0 3.63e-01 76.3% 72.9%
3742644 5.1.4.342 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EDC4L 0.53 43.0 2.76e-01 92.1% 74.5%
3643555 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 43.0 2.84e-01 92.1% 56.2%
3715939 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 43.0 3.14e-01 89.5% 49.3%
3033584 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.51 40.0 3.18e-01 86.8% 84.1%
3258377 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.51 41.0 3.95e-01 98.7% 78.9%
3656514 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 34.0 3.22e-01 77.6% 55.8%
3938829 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 43.0 2.74e-01 96.1% 78.8%
3922387 260.1.1.1 ↗ a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin 0.50 42.0 2.54e-01 94.7% 28.4%
D2 high residues 92-146
PDB