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ON529853.1__UTC29175.1__BAMBUS_00930__00092

Bact-Vir

ON529853.1__UTC29175.1__BAMBUS_00930__00092

Identity

Accession:
ON529853 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brevundimonas_phage_vB_BpoS-Bambus

TaxID: 2948597

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-109
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.68 50.0 3.54e-01 77.4% 39.9%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.66 52.0 5.51e-01 83.3% 98.7%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 47.0 3.23e-01 75.0% 43.6%
3gxwC00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 48.0 4.56e-01 81.0% 66.0%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 44.0 2.98e-01 71.4% 54.6%
4fvkA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 45.0 2.98e-01 73.8% 38.1%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 45.0 3.10e-01 76.2% 73.9%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.62 45.0 3.79e-01 76.2% 72.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.61 46.0 3.51e-01 78.6% 64.4%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.60 45.0 3.82e-01 79.8% 68.6%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.60 45.0 4.47e-01 79.8% 98.8%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.60 48.0 3.15e-01 86.9% 58.1%
2fm8B00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 42.0 3.71e-01 72.6% 96.0%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 54.0 4.27e-01 100.0% 100.0%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.58 42.0 2.86e-01 77.4% 28.1%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.58 41.0 3.96e-01 76.2% 95.1%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 43.0 3.97e-01 79.8% 100.0%
3fcxB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 41.0 2.91e-01 77.4% 96.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.55 37.0 3.12e-01 70.2% 76.3%
1dxkA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 37.0 2.78e-01 70.2% 95.0%
4ao8A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 39.0 2.79e-01 73.8% 28.2%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 38.0 3.35e-01 82.1% 50.8%
3jcmN01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 2.74e-01 71.4% 95.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.52 35.0 3.51e-01 71.4% 65.6%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 35.0 2.64e-01 71.4% 81.5%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.51 35.0 2.97e-01 70.2% 57.9%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 35.0 3.09e-01 75.0% 53.3%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4578621 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.73 54.0 3.93e-01 78.6% 40.0%
5053632 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.72 36.0 3.14e-01 73.8% 32.8%
3999576 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.70 49.0 4.11e-01 73.8% 51.7%
5038973 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 48.0 3.10e-01 76.2% 32.6%
3415735 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.65 46.0 4.49e-01 75.0% 86.3%
4028814 604.1.1.135 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 0.65 59.0 4.24e-01 100.0% 50.4%
3242777 3459.1.1.2 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF4773 0.65 46.0 4.08e-01 73.8% 84.9%
3204996 5.1.3.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.64 46.0 2.96e-01 77.4% 93.3%
4954762 241.1.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.63 48.0 4.29e-01 83.3% 88.8%
3224967 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 44.0 3.08e-01 72.6% 23.9%
3737921 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.63 46.0 2.93e-01 76.2% 91.0%
3737742 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.63 45.0 4.21e-01 76.2% 89.0%
4928046 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 35.0 3.07e-01 73.8% 37.5%
4884147 212.1.1.10 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › RNase_PH 0.63 48.0 3.86e-01 81.0% 98.7%
4985494 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.63 47.0 2.89e-01 78.6% 14.5%
5014331 2004.1.1.293 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.62 47.0 2.70e-01 78.6% 50.3%
3364063 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.62 45.0 3.80e-01 76.2% 64.3%
5063996 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.62 54.0 3.97e-01 96.4% 64.0%
4262169 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 47.0 4.57e-01 81.0% 94.6%
4048220 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 43.0 4.39e-01 71.4% 93.8%
3415741 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.62 57.0 4.69e-01 100.0% 60.0%
3636263 5.1.3.137 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.61 46.0 3.03e-01 81.0% 91.4%
3218510 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.61 40.0 3.87e-01 81.0% 58.2%
4058654 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 42.0 4.06e-01 73.8% 86.9%
3967957 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.60 56.0 3.53e-01 100.0% 66.8%
3271880 223.2.1.23 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.60 41.0 3.19e-01 71.4% 37.4%
5011042 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.60 44.0 3.85e-01 78.6% 56.9%
5060431 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.60 45.0 2.85e-01 78.6% 18.2%
4274998 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.59 48.0 2.93e-01 86.9% 38.3%
4929483 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.59 52.0 4.65e-01 100.0% 69.2%
5047148 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 46.0 3.04e-01 83.3% 47.0%
3709769 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 42.0 2.83e-01 76.2% 47.0%
5059555 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.58 45.0 2.85e-01 81.0% 18.4%
3236870 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 40.0 3.45e-01 72.6% 48.5%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.57 43.0 3.48e-01 79.8% 49.0%
4522761 3308.1.1.0 ↗ beta duplicates or obligate multimers › periplasmic lysozyme inhibitor of I-type lysozyme-like › periplasmic lysozyme inhibitor of I-type lysozyme › periplasmic lysozyme inhibitor of I-type lysozyme 0.56 46.0 4.21e-01 88.1% 91.8%
4935472 330.4.1.0 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.55 35.0 3.83e-01 72.6% 77.1%
4568749 2004.1.1.585 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23 0.54 47.0 3.12e-01 96.4% 39.7%
185415 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.52 35.0 3.51e-01 71.4% 65.6%
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.52 40.0 3.38e-01 81.0% 60.7%