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ON529853.1__UTC29190.1__BAMBUS_01080__00107

Bact-Vir

ON529853.1__UTC29190.1__BAMBUS_01080__00107

Identity

Accession:
ON529853 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brevundimonas_phage_vB_BpoS-Bambus

TaxID: 2948597

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-101
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 48.0 4.84e-01 87.8% 55.4%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.82 42.0 5.08e-01 81.1% 76.3%
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.78 44.0 5.30e-01 71.1% 83.6%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 49.0 5.19e-01 87.8% 73.4%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.76 46.0 4.96e-01 87.8% 71.4%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 44.0 4.33e-01 88.9% 53.5%
7xv3R01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.75 52.0 3.62e-01 93.3% 23.6%
2etnB01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.75 46.0 4.99e-01 74.4% 73.7%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.74 48.0 4.62e-01 88.9% 57.7%
2l6hA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.72 45.0 3.74e-01 86.7% 37.0%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 43.0 4.16e-01 80.0% 55.9%
6ygiB01 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.69 45.0 3.78e-01 82.2% 40.4%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.68 44.0 4.33e-01 77.8% 61.1%
4dvyP01 1.10.357.130 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.67 43.0 3.31e-01 91.1% 29.4%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.67 42.0 4.36e-01 82.2% 68.3%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.67 39.0 4.52e-01 80.0% 81.5%
4akvA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 47.0 3.68e-01 91.1% 35.8%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 46.0 4.80e-01 94.4% 85.0%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 43.0 4.65e-01 80.0% 82.1%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 41.0 4.28e-01 85.6% 75.9%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 49.0 4.67e-01 86.7% 81.1%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 46.0 4.38e-01 91.1% 87.2%
4gx0A01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 46.0 4.46e-01 91.1% 89.3%
7smtA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.54 45.0 3.68e-01 93.3% 71.3%
2hqcA01 1.20.1640.10 Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain 0.53 41.0 3.12e-01 81.1% 93.6%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3386554 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.85 49.0 5.33e-01 85.6% 69.3%
3474500 632.7.1.25 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › PF27508 0.83 53.0 5.54e-01 78.9% 69.4%
3248267 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.83 50.0 4.15e-01 88.9% 37.2%
3283001 605.1.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.80 49.0 4.80e-01 86.7% 57.9%
149872 3291.1.1.1 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 0.78 47.0 5.06e-01 87.8% 69.6%
3782089 1065.1.1.0 ↗ alpha bundles › SPX domain › SPX domain › SPX domain 0.78 53.0 4.27e-01 87.8% 38.2%
3268975 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.76 50.0 4.17e-01 87.8% 40.7%
4025 150.5.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.75 44.0 4.33e-01 88.9% 53.5%
3618651 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.75 50.0 5.12e-01 95.6% 71.8%
3507431 11.2.1.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin 0.75 50.0 3.70e-01 93.3% 27.6%
4186985 605.1.1.191 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › NtrY_N 0.75 47.0 4.17e-01 82.2% 45.6%
4210734 632.22.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.74 46.0 4.41e-01 80.0% 53.3%
3626481 603.1.1.105 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 0.74 51.0 4.77e-01 88.9% 58.2%
3973966 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 46.0 4.45e-01 80.0% 58.0%
3634960 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.72 48.0 4.54e-01 86.7% 56.4%
4034092 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.71 45.0 4.87e-01 87.8% 77.3%
3483986 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 45.0 4.43e-01 80.0% 62.1%
3996391 5001.1.1.3 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.69 56.0 3.71e-01 93.3% 23.7%
3612151 1189.1.1.2 ↗ alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG_B 0.67 46.0 3.20e-01 71.1% 82.5%
5055924 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.67 52.0 4.67e-01 96.7% 59.2%
3906123 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 45.0 4.17e-01 80.0% 54.8%
4817720 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.66 39.0 2.69e-01 77.8% 17.7%
5038847 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 40.0 4.40e-01 80.0% 77.1%
3196820 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.64 46.0 3.11e-01 88.9% 19.2%
3652633 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.61 50.0 4.43e-01 88.9% 93.1%
4176312 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.60 43.0 4.17e-01 83.3% 67.0%
3599581 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 48.0 2.85e-01 85.6% 20.2%
3590012 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.59 42.0 2.93e-01 73.3% 46.8%
3817666 109.4.1.585 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF627 0.58 40.0 2.92e-01 72.2% 30.4%
4232718 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.55 42.0 4.10e-01 83.3% 75.0%
3535346 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.54 42.0 2.73e-01 85.6% 19.1%
4995874 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.51 43.0 3.17e-01 92.2% 78.8%