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ON529853.1__UTC29195.1__BAMBUS_01130__00112

Bact-Vir

ON529853.1__UTC29195.1__BAMBUS_01130__00112

Identity

Accession:
ON529853 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brevundimonas_phage_vB_BpoS-Bambus

TaxID: 2948597

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-94
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.81 47.0 4.34e-01 80.0% 47.7%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.71 45.0 4.76e-01 70.0% 70.7%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 49.0 4.66e-01 87.8% 66.3%
6a95A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 43.0 3.78e-01 83.3% 46.8%
1htmD00 3.90.20.10 Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › 0.64 45.0 4.08e-01 74.4% 61.8%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.62 50.0 4.68e-01 97.8% 68.8%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.61 47.0 3.82e-01 81.1% 49.4%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.60 44.0 4.24e-01 76.7% 74.5%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.60 44.0 3.88e-01 94.4% 51.9%
2fsfB04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 50.0 3.80e-01 92.2% 70.8%
7cfmR01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 50.0 3.60e-01 100.0% 65.4%
3pe0A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 40.0 3.83e-01 75.6% 94.3%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.55 30.0 3.06e-01 88.9% 52.9%
4ielA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 37.0 3.45e-01 94.4% 61.2%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4932083 4163.1.1.1 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.73 53.0 4.73e-01 86.7% 55.8%
3576275 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.69 53.0 4.66e-01 83.3% 55.4%
4946656 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 47.0 4.28e-01 72.2% 55.8%
4464634 632.19.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A 0.67 46.0 4.64e-01 84.4% 70.0%
3766742 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.67 47.0 4.30e-01 72.2% 57.4%
3663497 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.66 45.0 3.73e-01 70.0% 78.7%
4133182 5043.2.1.10 ↗ extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › HAMP 0.66 48.0 4.54e-01 77.8% 71.8%
3206663 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.63 57.0 4.16e-01 100.0% 60.0%
3504306 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 44.0 4.19e-01 72.2% 84.8%
3600606 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.62 50.0 3.96e-01 84.4% 90.3%
3944323 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.62 50.0 4.80e-01 100.0% 76.0%
3795092 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.61 49.0 4.29e-01 87.8% 57.8%
3219921 5001.1.1.84 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.59 55.0 3.75e-01 100.0% 73.0%
3193079 1075.1.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.59 42.0 3.36e-01 75.6% 62.6%
4014788 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.58 46.0 4.34e-01 98.9% 71.2%
3617130 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.57 46.0 4.56e-01 86.7% 89.5%
3213627 626.1.1.1 ↗ alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 0.55 46.0 3.15e-01 95.6% 80.5%
3491689 604.1.1.159 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TMEM120A-B 0.54 45.0 4.16e-01 92.2% 71.7%
3735055 109.4.1.340 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BP28CT 0.52 41.0 2.71e-01 87.8% 65.7%
3695164 196.1.1.0 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS 0.51 40.0 3.97e-01 96.7% 79.6%