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ON529853.1__UTC29378.1__BAMBUS_02960__00295

Bact-Vir

ON529853.1__UTC29378.1__BAMBUS_02960__00295

Identity

Accession:
ON529853 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-74
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.74 50.0 3.94e-01 100.0% 36.7%
5d1oA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.70 52.0 5.23e-01 89.0% 78.1%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.68 61.0 4.82e-01 100.0% 91.3%
2qz5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.68 59.0 4.73e-01 100.0% 68.4%
4g7nA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.66 46.0 3.91e-01 90.4% 43.8%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.21e-01 100.0% 66.2%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 42.0 4.15e-01 100.0% 61.8%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.65 40.0 3.46e-01 100.0% 39.3%
3cxbA02 3.30.390.70 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Salmonella typhimurium protein 0.65 38.0 3.43e-01 94.5% 39.6%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.65 43.0 4.54e-01 79.5% 77.3%
4kt3B00 3.10.450.170 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens 0.64 45.0 3.76e-01 100.0% 42.2%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.64 38.0 3.45e-01 100.0% 42.3%
6kogB01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.63 54.0 3.35e-01 95.9% 58.3%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 53.0 4.48e-01 100.0% 64.7%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 38.0 4.20e-01 100.0% 76.7%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 3.87e-01 100.0% 61.3%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.62 50.0 3.97e-01 93.2% 98.2%
8cjhA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.61 52.0 3.24e-01 94.5% 59.6%
4qamB00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.60 53.0 4.03e-01 100.0% 61.7%
4lg3A01 3.10.310.90 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.59 50.0 4.19e-01 97.3% 80.6%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 37.0 3.77e-01 100.0% 63.4%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.59 51.0 4.05e-01 100.0% 82.1%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 50.0 4.06e-01 100.0% 50.4%
1nbuA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.59 47.0 4.07e-01 89.0% 78.0%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 36.0 3.54e-01 100.0% 54.9%
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.58 50.0 4.03e-01 100.0% 82.2%
1rlhA02 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.58 43.0 3.88e-01 79.5% 100.0%
8evkA01 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.58 45.0 4.05e-01 87.7% 88.0%
3a32A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.58 53.0 3.38e-01 100.0% 35.2%
1nnvA01 3.10.450.140 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative 0.57 45.0 3.99e-01 100.0% 61.0%
3oq3B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 4.13e-01 91.8% 65.0%
3hm2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 39.0 3.10e-01 74.0% 46.8%
2ky8A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.56 34.0 3.52e-01 97.3% 62.9%
2gu1A02 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 50.0 4.48e-01 100.0% 78.8%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 48.0 4.15e-01 100.0% 71.7%
5fi9A01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.56 51.0 3.15e-01 100.0% 83.9%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.55 48.0 4.20e-01 100.0% 89.4%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.89e-01 100.0% 53.4%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.53e-01 100.0% 62.3%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 47.0 3.47e-01 100.0% 36.4%
2olsA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 44.0 3.50e-01 87.7% 95.8%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.54 46.0 3.95e-01 98.6% 92.7%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.54 46.0 4.50e-01 95.9% 96.3%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.39e-01 83.6% 74.6%
1ln0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.54 38.0 3.60e-01 75.3% 82.6%
2kvkA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.54 47.0 3.81e-01 100.0% 82.6%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.53 46.0 3.67e-01 97.3% 56.6%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 38.0 3.00e-01 100.0% 33.7%
1vmoA00 2.100.10.20 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Vitelline membrane outer layer protein I (VOMI) 0.53 43.0 3.27e-01 87.7% 71.2%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.53 43.0 3.01e-01 93.2% 26.3%
4uqfA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.52 44.0 3.76e-01 100.0% 73.9%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.50e-01 87.7% 83.9%
2fnqA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.51 44.0 3.86e-01 100.0% 97.3%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.51 43.0 3.58e-01 100.0% 79.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3443190 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.71 47.0 3.26e-01 100.0% 22.8%
4234511 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.70 44.0 3.30e-01 100.0% 25.4%
3491927 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.70 63.0 5.10e-01 100.0% 65.2%
3532301 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.69 47.0 3.36e-01 100.0% 24.9%
3858171 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.69 45.0 3.10e-01 100.0% 20.0%
4947870 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.69 58.0 4.19e-01 93.2% 43.4%
3846048 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.68 46.0 3.32e-01 100.0% 24.9%
3980806 636.1.1.2 alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › Sif 0.68 38.0 2.87e-01 90.4% 22.2%
4355756 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.68 58.0 4.02e-01 91.8% 47.6%
3846061 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.68 47.0 3.45e-01 100.0% 28.9%
3502411 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.68 61.0 5.39e-01 100.0% 85.7%
3509403 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.68 48.0 3.30e-01 100.0% 21.6%
4015654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 41.0 4.20e-01 100.0% 64.3%
4015537 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 40.0 3.97e-01 100.0% 57.7%
3840448 11.2.1.55 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SYDE 0.66 59.0 4.80e-01 100.0% 61.5%
3691310 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.65 56.0 4.70e-01 95.9% 94.4%
185329 636.1.1.2 alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › Sif 0.65 38.0 2.84e-01 94.5% 21.8%
3611020 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 57.0 4.11e-01 98.6% 45.9%
3506156 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 39.0 3.88e-01 100.0% 60.0%
5000810 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 39.0 3.75e-01 100.0% 52.9%
3715818 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.64 39.0 3.57e-01 100.0% 47.4%
4981192 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 45.0 3.16e-01 78.1% 61.6%
1175040 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.62 38.0 4.20e-01 100.0% 76.7%
3958286 7581.1.1.0 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.62 52.0 3.58e-01 94.5% 57.4%
3841963 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.62 54.0 4.12e-01 100.0% 66.3%
3498772 11.2.1.24 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › SPATA6 0.61 54.0 4.42e-01 100.0% 72.1%
5081312 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.61 51.0 3.70e-01 94.5% 88.6%
3515806 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 43.0 3.48e-01 72.6% 39.3%
4934627 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 42.0 3.62e-01 100.0% 46.1%
5043802 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 45.0 3.90e-01 84.9% 50.4%
4609141 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.60 52.0 4.29e-01 100.0% 65.7%
2391272 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.60 37.0 3.45e-01 100.0% 48.4%
3185712 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 3.87e-01 90.4% 48.8%
4138585 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.59 52.0 3.36e-01 100.0% 27.2%
1097261 3742.1.1.1 a+b two layers › hypothetical protein DESPIG_00776 › hypothetical protein DESPIG_00776 › hypothetical protein DESPIG_00776 › DUF4875 0.59 50.0 3.85e-01 97.3% 59.7%
3397523 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.59 50.0 4.23e-01 100.0% 67.4%
4876572 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.59 36.0 3.40e-01 100.0% 51.1%
3307205 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.58 49.0 4.22e-01 98.6% 67.2%
4028363 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 49.0 4.62e-01 98.6% 92.2%
4996322 821.1.1.14 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.56 45.0 4.06e-01 90.4% 89.5%
5027170 3781.2.1.0 a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › ssDNA-binding protein ThermoDBP-related › ssDNA-binding protein ThermoDBP-related 0.55 50.0 4.49e-01 97.3% 99.0%
3925418 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.55 45.0 3.37e-01 94.5% 67.3%
4292124 213.1.1.22 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N 0.55 49.0 3.63e-01 100.0% 63.7%
3680811 11.2.1.8 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.55 50.0 4.14e-01 100.0% 58.9%
2773699 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.55 47.0 3.93e-01 95.9% 86.5%
3878529 243.1.1.41 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 0.55 48.0 4.19e-01 97.3% 81.8%
3836869 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.55 46.0 4.04e-01 100.0% 88.3%
3461126 216.1.1.26 a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5 0.54 44.0 3.36e-01 100.0% 38.2%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.54 46.0 3.86e-01 95.9% 78.5%
3381541 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 45.0 3.21e-01 97.3% 80.0%
3594374 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 45.0 2.98e-01 95.9% 42.7%
3971020 71.1.1.13 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF1329 0.53 47.0 3.09e-01 100.0% 32.8%
3238556 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 45.0 3.39e-01 100.0% 88.3%
4658842 314.1.1.2 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.53 44.0 2.94e-01 95.9% 77.8%
4599667 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 46.0 3.53e-01 100.0% 41.8%
3254312 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 44.0 3.13e-01 98.6% 86.4%
1917149 230.1.1.6 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF 0.52 40.0 3.67e-01 90.4% 69.7%
3508588 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 43.0 3.02e-01 100.0% 38.5%
4301246 213.1.1.27 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.51 44.0 3.42e-01 98.6% 64.3%
3594014 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.50 45.0 3.14e-01 100.0% 40.8%
3253561 213.1.1.19 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 0.50 43.0 3.38e-01 100.0% 45.2%