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ON529853.1__UTC29585.1__BAMBUS_05270__00502

Bact-Vir

ON529853.1__UTC29585.1__BAMBUS_05270__00502

Identity

Accession:
ON529853 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.77 63.0 6.02e-01 95.5% 76.3%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.75 60.0 5.75e-01 95.5% 75.0%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 57.0 5.62e-01 95.5% 85.9%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.67 59.0 5.49e-01 95.5% 100.0%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.67 56.0 5.31e-01 95.5% 77.2%
2zw2A00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.65 57.0 5.27e-01 95.5% 100.0%
3gqcC01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.61 52.0 4.22e-01 100.0% 67.9%
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.61 51.0 4.76e-01 94.0% 89.3%
7uinD01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 51.0 3.94e-01 100.0% 71.3%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 49.0 4.63e-01 91.0% 91.4%
4cyuA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.60 51.0 4.02e-01 100.0% 85.7%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 4.64e-01 95.5% 92.1%
1rtzA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.59 50.0 3.97e-01 100.0% 86.2%
1t4aA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.59 48.0 4.54e-01 89.6% 100.0%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.58 48.0 4.04e-01 100.0% 81.5%
2xzmE02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.57 37.0 3.33e-01 73.1% 46.3%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 47.0 3.35e-01 100.0% 30.0%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.57 47.0 4.30e-01 95.5% 88.5%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.57 48.0 3.81e-01 100.0% 88.5%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 48.0 4.19e-01 95.5% 78.6%
3oq2A00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 49.0 4.35e-01 100.0% 80.8%
6wcsA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.56 45.0 3.21e-01 89.6% 99.5%
1vw4U00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.56 45.0 4.23e-01 95.5% 72.0%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 47.0 4.55e-01 94.0% 98.6%
6lpnA03 3.30.70.2190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 49.0 4.10e-01 100.0% 88.6%
5v7qZ00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.55 44.0 4.69e-01 95.5% 100.0%
1t94B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.54 47.0 3.96e-01 100.0% 89.1%
2vyrA00 1.10.245.10 Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain 0.54 43.0 4.03e-01 88.1% 100.0%
3aqpA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 3.59e-01 100.0% 96.9%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 4.33e-01 88.1% 100.0%
6spbZ00 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.54 43.0 4.56e-01 92.5% 100.0%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 46.0 4.21e-01 100.0% 92.6%
2gffA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 4.04e-01 95.5% 94.8%
2lu2A00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 45.0 4.28e-01 97.0% 100.0%
3mtjA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 44.0 4.23e-01 92.5% 96.1%
1t0tV02 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.53 44.0 3.84e-01 98.5% 96.4%
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.53 44.0 4.26e-01 97.0% 92.3%
6k2eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 44.0 4.46e-01 95.5% 95.6%
1iooA00 3.90.730.10 Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like 0.52 46.0 3.31e-01 98.5% 89.8%
3psfA03 1.10.3500.10 Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like 0.52 45.0 2.93e-01 98.5% 33.3%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.51 45.0 4.21e-01 100.0% 85.5%
4makB00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 44.0 4.29e-01 100.0% 90.8%
1vq8W01 3.30.1390.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 0.50 43.0 3.86e-01 98.5% 92.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4846323 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.83 56.0 5.50e-01 79.1% 65.7%
4013514 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.79 64.0 5.45e-01 95.5% 55.2%
4937773 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.79 63.0 6.77e-01 94.0% 98.3%
4967222 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.77 63.0 6.63e-01 95.5% 96.7%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.77 62.0 6.14e-01 95.5% 82.9%
4160542 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 6.48e-01 94.0% 98.3%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.76 61.0 6.50e-01 95.5% 98.3%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.75 60.0 5.80e-01 95.5% 77.3%
4084879 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.74 64.0 5.87e-01 95.5% 72.9%
3957553 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.72 62.0 3.77e-01 95.5% 22.3%
3440014 101.1.2.687 alpha arrays › HTH › HTH › winged helix domain › Methyltransf_11 0.69 52.0 4.09e-01 97.0% 37.9%
None 0.69 59.0 3.61e-01 95.5% 20.2%
4600921 304.41.1.0 a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain 0.68 59.0 4.56e-01 100.0% 58.1%
3394713 3115.1.1.3 a+b two layers › GP2-like › RplX-like › RplX-like › NRF 0.66 57.0 4.31e-01 97.0% 41.9%
4373561 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 55.0 4.83e-01 94.0% 97.0%
4947546 304.100.1.0 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like 0.65 56.0 5.11e-01 92.5% 98.8%
3470146 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.62 54.0 3.97e-01 100.0% 97.8%
4949196 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.60 48.0 5.08e-01 97.0% 100.0%
3474799 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 40.0 2.89e-01 71.6% 88.4%
3999047 3662.1.1.0 a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.58 41.0 3.38e-01 74.6% 68.0%
4992822 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.58 50.0 4.79e-01 98.5% 95.0%
3594819 508.1.1.0 a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain 0.57 49.0 4.02e-01 97.0% 96.2%
5006766 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.57 45.0 4.69e-01 95.5% 100.0%
4503399 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.57 46.0 4.85e-01 95.5% 98.3%
4599941 887.1.1.0 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e 0.56 45.0 4.78e-01 95.5% 98.3%
4046774 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.56 45.0 4.79e-01 95.5% 98.3%
4074028 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.56 45.0 4.63e-01 95.5% 90.8%
3263724 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.56 46.0 4.42e-01 97.0% 77.2%
4975002 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 46.0 4.39e-01 94.0% 100.0%
1420607 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.56 45.0 4.77e-01 95.5% 100.0%
4984667 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.56 46.0 4.42e-01 97.0% 95.0%
4604816 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.55 44.0 4.71e-01 94.0% 100.0%
4941492 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.55 43.0 4.53e-01 91.0% 100.0%
4487906 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.55 49.0 4.45e-01 100.0% 80.0%
4931568 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.55 47.0 3.28e-01 100.0% 31.2%
4119217 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.55 45.0 4.62e-01 97.0% 93.8%
5070656 821.1.1.15 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 0.55 39.0 3.64e-01 100.0% 60.0%
4038263 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.55 44.0 4.62e-01 94.0% 98.3%
4402584 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.55 48.0 4.60e-01 100.0% 90.0%
4994972 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.55 42.0 4.24e-01 88.1% 100.0%
5025706 304.6.1.1 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.55 47.0 3.24e-01 98.5% 37.6%
4251588 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.54 44.0 4.51e-01 95.5% 93.7%
5073968 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 45.0 4.37e-01 95.5% 97.3%
4597456 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.54 43.0 4.59e-01 92.5% 98.3%
1759006 887.1.1.1 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 0.54 43.0 4.56e-01 95.5% 100.0%
4938807 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.54 42.0 4.42e-01 97.0% 100.0%
3940066 4143.1.1.4 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_N_euk 0.54 43.0 3.18e-01 92.5% 95.5%
5035456 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.53 42.0 3.98e-01 88.1% 100.0%
4326572 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 43.0 4.18e-01 97.0% 82.7%
2557261 807.1.1.1 a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.53 40.0 3.74e-01 97.0% 64.1%
3391335 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.53 43.0 3.94e-01 92.5% 97.8%
147398 178.1.1.1 alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB 0.52 41.0 3.89e-01 91.0% 100.0%
4306719 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.51 37.0 3.74e-01 95.5% 83.1%
4949564 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.50 35.0 3.68e-01 85.1% 81.7%