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ON529853.1__UTC29616.1__BAMBUS_05580__00533
Bact-VirON529853.1__UTC29616.1__BAMBUS_05580__00533
Identity
- Accession:
- ON529853 ↗
- Kingdom:
- phage
Quality
83.0
mean pLDDT
Taxonomy
TaxID: 2948597
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-92
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27770.1 best | UCP036055 | 59.6 | 4.00e-16 | 97.8% | 45.2% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 48.0 | 5.38e-01 | 88.0% | 80.3% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 47.0 | 5.21e-01 | 88.0% | 79.2% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 46.0 | 5.55e-01 | 89.1% | 100.0% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 52.0 | 5.42e-01 | 96.7% | 83.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 46.0 | 5.45e-01 | 96.7% | 100.0% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 45.0 | 5.24e-01 | 88.0% | 98.4% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 38.0 | 4.40e-01 | 81.5% | 81.5% |
| 4o5vA03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.64 | 49.0 | 5.29e-01 | 96.7% | 97.4% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.64 | 35.0 | 4.44e-01 | 70.7% | 94.2% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.64 | 43.0 | 5.00e-01 | 87.0% | 100.0% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 35.0 | 4.21e-01 | 80.4% | 89.8% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.99e-01 | 75.0% | 91.4% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 3.72e-01 | 76.1% | 98.6% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 49.0 | 4.14e-01 | 89.1% | 85.6% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 52.0 | 4.39e-01 | 96.7% | 85.3% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 50.0 | 4.32e-01 | 96.7% | 73.2% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 46.0 | 3.18e-01 | 85.9% | 98.8% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 4.54e-01 | 85.9% | 98.5% |
| 6cnhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 38.0 | 4.05e-01 | 85.9% | 76.2% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 50.0 | 3.70e-01 | 94.6% | 57.3% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.57 | 50.0 | 4.25e-01 | 95.7% | 94.7% |
| 2b2cA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.57 | 35.0 | 4.12e-01 | 84.8% | 90.6% |
| 3bbjA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.56 | 42.0 | 3.06e-01 | 79.3% | 66.3% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.55 | 44.0 | 3.56e-01 | 87.0% | 75.4% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 35.0 | 4.04e-01 | 83.7% | 93.7% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 42.0 | 2.96e-01 | 83.7% | 31.9% |
| 3dkzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 42.0 | 3.89e-01 | 87.0% | 97.6% |
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 45.0 | 3.41e-01 | 93.5% | 99.6% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 4.11e-01 | 94.6% | 100.0% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 41.0 | 3.82e-01 | 87.0% | 98.3% |
| 3plsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.56e-01 | 73.9% | 91.3% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.52 | 41.0 | 3.95e-01 | 87.0% | 89.8% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 43.0 | 3.48e-01 | 94.6% | 78.9% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 45.0 | 3.93e-01 | 100.0% | 69.4% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.65e-01 | 85.9% | 91.4% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.51 | 39.0 | 3.75e-01 | 84.8% | 93.7% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.97e-01 | 82.6% | 88.0% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 39.0 | 3.46e-01 | 84.8% | 90.8% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954938 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 53.0 | 6.08e-01 | 96.7% | 100.0% |
| 5073368 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 46.0 | 5.25e-01 | 89.1% | 85.7% |
| 3959531 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 50.0 | 5.52e-01 | 98.9% | 94.3% |
| 5020252 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 51.0 | 4.64e-01 | 100.0% | 58.3% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.69 | 61.0 | 6.24e-01 | 97.8% | 96.7% |
| 3540253 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.69 | 54.0 | 5.36e-01 | 97.8% | 80.0% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 4.44e-01 | 96.7% | 52.9% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 45.0 | 5.25e-01 | 98.9% | 100.0% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 45.0 | 5.19e-01 | 96.7% | 98.5% |
| 3411605 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.66 | 28.0 | 3.61e-01 | 71.7% | 66.7% |
| 5034832 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 5.37e-01 | 87.0% | 98.6% |
| 6423 | 243.3.1.13 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 | 0.65 | 38.0 | 4.40e-01 | 81.5% | 81.5% |
| 5031673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 5.35e-01 | 94.6% | 81.0% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 5.20e-01 | 98.9% | 97.3% |
| 3613205 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 56.0 | 4.03e-01 | 100.0% | 48.6% |
| 3639196 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.61 | 33.0 | 4.35e-01 | 79.3% | 100.0% |
| 3591211 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 49.0 | 5.19e-01 | 93.5% | 98.8% |
| 3471772 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.60 | 51.0 | 5.23e-01 | 91.3% | 93.3% |
| 4957055 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.60 | 36.0 | 3.97e-01 | 88.0% | 74.7% |
| 3267804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 52.0 | 5.12e-01 | 95.7% | 95.0% |
| 3964458 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 41.0 | 4.16e-01 | 71.7% | 100.0% |
| 4932514 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.58 | 52.0 | 4.80e-01 | 100.0% | 80.8% |
| 4003702 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 49.0 | 3.87e-01 | 95.7% | 75.9% |
| 3560129 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.56 | 43.0 | 3.92e-01 | 82.6% | 84.0% |
| 2549179 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.56 | 45.0 | 4.56e-01 | 91.3% | 88.9% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 44.0 | 4.50e-01 | 84.8% | 100.0% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 48.0 | 4.49e-01 | 95.7% | 81.7% |
| 3943067 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.54 | 41.0 | 3.59e-01 | 91.3% | 53.6% |
| 3213378 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.53 | 37.0 | 2.61e-01 | 71.7% | 25.3% |
| 3619246 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 36.0 | 3.51e-01 | 70.7% | 64.8% |
| 4255495 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.53 | 47.0 | 3.47e-01 | 100.0% | 81.6% |
| 3589473 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 37.0 | 3.95e-01 | 73.9% | 85.0% |
| 3973725 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.52 | 42.0 | 4.12e-01 | 85.9% | 89.8% |
| 3633568 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 2.83e-01 | 85.9% | 27.9% |
| 3575208 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 37.0 | 3.25e-01 | 87.0% | 52.7% |
| 5004850 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.50 | 28.0 | 3.53e-01 | 70.7% | 98.0% |
D2
medium
residues 93-157
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yq1C00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.76 | 60.0 | 4.74e-01 | 86.2% | 68.7% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.71 | 58.0 | 4.94e-01 | 90.8% | 55.6% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.69 | 49.0 | 5.30e-01 | 92.3% | 100.0% |
| 1d0nA03 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.69 | 46.0 | 3.75e-01 | 83.1% | 37.2% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.67 | 43.0 | 4.49e-01 | 86.2% | 72.9% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.65 | 47.0 | 3.61e-01 | 78.5% | 100.0% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 52.0 | 4.83e-01 | 90.8% | 96.3% |
| 3psfA03 | 1.10.3500.10 | Mainly Alpha › Orthogonal Bundle › Tex N-terminal region-like › Tex N-terminal region-like | 0.60 | 43.0 | 2.82e-01 | 78.5% | 66.3% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.60 | 44.0 | 3.92e-01 | 83.1% | 89.2% |
| 1bdyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 46.0 | 3.76e-01 | 89.2% | 44.7% |
| 3v4mB00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 47.0 | 4.04e-01 | 87.7% | 93.3% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 49.0 | 4.44e-01 | 93.8% | 100.0% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 44.0 | 4.13e-01 | 84.6% | 98.8% |
| 3rgzA02 | 3.30.1490.310 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 44.0 | 4.52e-01 | 90.8% | 91.8% |
| 5uzgA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 41.0 | 3.77e-01 | 83.1% | 95.6% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 44.0 | 4.00e-01 | 92.3% | 75.5% |
| 2llzA01 | 3.30.70.2360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 3.99e-01 | 95.4% | 100.0% |
| 3fgtA01 | 2.10.70.60 | Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 | 0.54 | 31.0 | 3.28e-01 | 78.5% | 63.6% |
| 2mraA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.54 | 40.0 | 3.44e-01 | 84.6% | 82.1% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 39.0 | 3.75e-01 | 80.0% | 73.7% |
| 7tzeA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.42e-01 | 83.1% | 63.3% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.52 | 40.0 | 3.77e-01 | 86.2% | 100.0% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.52 | 42.0 | 3.46e-01 | 93.8% | 76.3% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.52 | 33.0 | 3.44e-01 | 84.6% | 68.9% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 39.0 | 3.22e-01 | 84.6% | 95.3% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.51 | 40.0 | 2.87e-01 | 92.3% | 46.4% |
| 2e7yB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 43.0 | 2.94e-01 | 100.0% | 80.3% |
| 2ypjA00 | 2.60.120.1070 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 3.31e-01 | 89.2% | 48.4% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4378815 | 302.2.1.1 ↗ | a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit › RuBisCO_small | 0.74 | 58.0 | 5.19e-01 | 87.7% | 62.1% |
| 3691174 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 51.0 | 4.19e-01 | 81.5% | 47.5% |
| 4051573 | 304.5.1.18 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › PrmA | 0.66 | 54.0 | 4.76e-01 | 92.3% | 99.0% |
| 5079520 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.64 | 49.0 | 4.35e-01 | 81.5% | 78.9% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 45.0 | 4.86e-01 | 86.2% | 98.0% |
| 4980386 | 206.1.3.26 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_5 | 0.64 | 56.0 | 3.96e-01 | 100.0% | 60.0% |
| 4105022 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.64 | 50.0 | 4.52e-01 | 86.2% | 86.7% |
| 3252771 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 49.0 | 4.52e-01 | 84.6% | 84.7% |
| 4678670 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.63 | 50.0 | 4.66e-01 | 86.2% | 93.8% |
| 3839311 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.63 | 48.0 | 4.11e-01 | 84.6% | 93.6% |
| 4373827 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.63 | 49.0 | 4.50e-01 | 86.2% | 87.5% |
| 3184485 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.62 | 49.0 | 4.28e-01 | 90.8% | 77.8% |
| 5028017 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.62 | 49.0 | 4.40e-01 | 89.2% | 87.4% |
| 4399086 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.62 | 48.0 | 4.44e-01 | 86.2% | 89.4% |
| 4043605 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.62 | 49.0 | 4.51e-01 | 87.7% | 92.9% |
| 4223968 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.62 | 48.0 | 4.53e-01 | 86.2% | 93.8% |
| 3629469 | 304.4.1.53 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › R1_ABCA1 | 0.62 | 50.0 | 4.63e-01 | 92.3% | 97.6% |
| 4534213 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.62 | 48.0 | 4.43e-01 | 86.2% | 88.2% |
| 4635441 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.61 | 45.0 | 4.04e-01 | 80.0% | 91.6% |
| 3587356 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.61 | 48.0 | 4.32e-01 | 86.2% | 86.7% |
| 4394754 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.61 | 47.0 | 4.26e-01 | 84.6% | 82.2% |
| 4638999 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.60 | 47.0 | 4.42e-01 | 86.2% | 96.2% |
| 3666791 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 43.0 | 4.66e-01 | 80.0% | 100.0% |
| 3620456 | 221.1.1.64 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N | 0.59 | 44.0 | 3.73e-01 | 92.3% | 47.3% |
| 3331003 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.57 | 41.0 | 3.59e-01 | 81.5% | 87.3% |
| 3769262 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 45.0 | 4.01e-01 | 87.7% | 89.5% |
| 5075866 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 42.0 | 4.00e-01 | 84.6% | 96.2% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.55 | 44.0 | 3.66e-01 | 95.4% | 68.9% |
| 3220524 | 304.9.1.77 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 | 0.55 | 41.0 | 3.54e-01 | 83.1% | 75.5% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.53 | 38.0 | 3.74e-01 | 80.0% | 72.0% |
| 3737842 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.52 | 45.0 | 2.80e-01 | 100.0% | 46.6% |
| 3894988 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 42.0 | 3.58e-01 | 92.3% | 78.3% |
| 3624276 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.50 | 38.0 | 3.96e-01 | 81.5% | 98.3% |
| 3577596 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.50 | 40.0 | 3.24e-01 | 93.8% | 86.2% |